Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCSSSCCCCSSSSSSCCCHHHCCCCCCCCCCCCCCSSSSCCCHHHCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCSSSSSCHHHHHHHHHHCCCCCCCSSSCCCCCCCCSSSSSHHHCCCCCCCCSSHHHHHHHHCCCCSSSSSCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCC MSPCGRARRQTSRGAMAVLAWKFPRTRLPMGASALCVVVLCWLYIFPVYRLPNEKEIVQGVLQQGTAWRRNQTAARAFRKQMEDCCDPAHLFAMTKMNSPMGKSMWYDGEFLYSFTIDNSTYSLFPQATPFQLPLKKCAVVGNGGILKKSGCGRQIDEANFVMRCNLPPLSSEYTKDVGSKSQLVTANPSIIRQRFQNLLWSRKTFVDNMKIYNHSYIYMPAFSMKTGTEPSLRVYYTLSDVGANQTVLFANPNFLRSIGKFWKSRGIHAKRLSTGLFLVSAALGLCEEVAIYGFWPFSVNMHEQPISHHYYDNVLPFSGFHAMPEEFLQLWYLHKIGALRMQLDPCEDTSLQPTS |
1 | 5bo6A | 0.32 | 0.25 | 7.61 | 1.17 | DEthreader | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKVFSISNNFRSLLPDVSPIMKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTE-AFQRDVGRKTNLTTFNPSILEKYYNNLLTDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHQLKVQLAWPGNI-MQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNREDLPYHYYDTFTTKWQSHQLPAEFQLLYRMHGEGLTKLTLS-HC-----A-- |
2 | 5bo6A | 0.34 | 0.27 | 7.99 | 2.58 | SPARKS-K | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSHKYVFSISNNFRSLLPDVSPIMKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTE-AFQRDVGRKTNLTTFNPSILEKYYNNLIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTRELPYHYYDKTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
3 | 5bo6A | 0.32 | 0.25 | 7.53 | 1.74 | MapAlign | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHYVFSISNNFRSLLPDVSPINKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTE-AFQRDVGRKTNLTTFNPSILEYYNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHQLKVQLAWPGN-IMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDNTREDLPYHYYDFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
4 | 5bo6A | 0.34 | 0.27 | 7.99 | 1.67 | CEthreader | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHYVFSISNNFRSLLPDVSPIMKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPT-EAFQRDVGRKTNLTTFNPSILEKYYNNLIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNREDLPYHYYDFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
5 | 5bo6A | 0.34 | 0.27 | 8.07 | 1.99 | MUSTER | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHYVFSISNNFRSLLPDVSPIMKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPT-EAFQRDVGRKTNLTTFNPSILEKYYNNLLTDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTRELPYHYYDKTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
6 | 5bo6A | 0.34 | 0.27 | 7.99 | 6.41 | HHsearch | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHYVFSISNNFRSLLPDVSPIMKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTE-AFQRDVGRKTNLTTFNPSILEKYYNNLLTDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNREDLPYHYYDKKGTKQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
7 | 5bo6A | 0.34 | 0.27 | 7.99 | 2.61 | FFAS-3D | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSKYVFSISNNFRSLLPDVSPINKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPT-EAFQRDVGRKTNLTTFNPSILEKYYNNLIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNREDLPYHYYDKTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHC--------- |
8 | 5bo6A | 0.29 | 0.23 | 6.92 | 1.67 | EigenThreader | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYCAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPT-EAFQRDVGRKTNLTTFNPSILEKYY----NDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYHYYFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
9 | 5bo6A | 0.34 | 0.26 | 7.91 | 3.15 | CNFpred | | -------------------------------------------------------------------WKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSKYVFSISNNFRSLLPDVSPIMNHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTE-AFQRDVGRKTNLTTFNPSILEKYYNNLIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNREDLPYHYYDKKGT-QESHQLPAEFQLLYRMHGEGLTKLTLSHCA-------- |
10 | 4js1A | 0.17 | 0.13 | 4.15 | 1.00 | DEthreader | | -------------------------PE-ASFQV-WN--S--KNL-IPRLQKIW-------------------FSAEALRCHLRDHVNV--S-MVEV--T-DFP------------FNTSEWEGYLPKESIRTGPWGRCAVVSSAGSLKSSQLGREIDDHDAVLRFNGAPTA-NFQQDVGTKTTIRLMNSQLVTTE---K--RFLKD-SLYN-E--GILIVWDPSWNPDYNFFNNYKTYRKLH-PNQPFYILKPQMPWELWDILQEISPEIPPPSSGMLGIIIMMTLCDQVDIYEFLPSKRK---TDVCYYYQKFFDACGAYHPLLYEKNLVKHLN--QGTDEDIYLLG-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|