Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580
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| SS Seq | CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC MDRMTEDALRLNLLKRSLDPADERDDVLAKRLKMEGHEAMERLKMLALLKRKDLANLEVPHELPTKQDGSGVKGYEEKLNGNLRPHGDNRTAGRPGKENINDEPVDMSARRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKGIEERQQLIKQLRDELRLEEARLVLLKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKLPSRPGAQGVEPQNLRTLQGHSVIRSATNTTLPHMLMSQRVIAPNPAQLQGQRGPPKPGLVRTTTPNMNPAINYQPQSSSSVPCQRTTSSAIYMNLASHIQPGTVNRVSSPLPSPSAMTDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKSCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPTTAPAVSSVSKQETIMRHHTLRQAPQPQSSLQRGIPTSARSMLSNFAQAPQLSVPGGLLGMPGVNIAYLNTGIGGHKGPSLADRQREYLLDMIPPRSISQSISGQK |
1 | 1vt4I3 | 0.05 | 0.04 | 2.01 | 1.46 | CEthreader | | IALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------------------------------------------- |
2 | 6gmhQ | 0.07 | 0.06 | 2.69 | 1.30 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFAGLGQMYIYRGENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD--AWSLIGNLHLAKQEWGPGQKKFERIL----KQPSTQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQ------ECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLN |
3 | 5yfpE | 0.10 | 0.09 | 3.49 | 1.37 | SPARKS-K | | EKDQDAIREAIKPYIRTFESTLKELKNLNEETKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKDDRLTNVTQVVSPLGDKLETAIKKKQNYIQVELIRRYNDFYSMGKSDIVE--------QLRLSKNWKLNLKSVKLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSLNEIAIVNVIQSFINQHDYFIFIKNVKFK---EQLIDFENHSVIIETSMQNLINDVETVIKNESKIVKRVFEEKATHVIQLKIEPRFEVLLRNSLSISNLAYVRTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFG--------------IEKRSLEAILVDMTSKFTYDKEINKR-VLLDKYKEPNSPANYSLN-DVDSMLKIPNKAHLYILEILKIMFLGIVDSYM-----EIALEVAYWKICKVDINKTAGVVNL-----NFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQEILINIILQETISTKFSAILCKQKKKDFVPKSQELLDQDTEIVNILNLIFEQSSKFLIGEELYGLLLSHYSHFQVNSIGGVVV |
4 | 1vt4I3 | 0.05 | 0.05 | 2.21 | 2.03 | MapAlign | | -----LHRSIVDHYNIPK-----TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE-----------------------------------------------------RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2l2lA | 0.70 | 0.05 | 1.44 | 2.58 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------GSPEERERMIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6gauA | 0.09 | 0.09 | 3.41 | 1.13 | CEthreader | | NLTDERVTQDEVVDEVVSDVAEAPSTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYGDDIREGLAAVISEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKSATDIGGLPGKLADCRSELYVVEGDSAGGSAKSGRDSMFQAILPLAIITALGTGIHDEFDIGKLRTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGM-ATNIPPHNLRELADAVFWALENHDADEEETLAAVMGR |
7 | 1m9iA | 0.07 | 0.06 | 2.60 | 1.02 | EigenThreader | | FPGFDPNQDAEALYTAM--KGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGK--DLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDERDLEADIIGDTSGHFQKMLVVLLQG-----TREEDDVVSEDLVQQDVQDLYEAGELTDEAQFIYILGNRSKQHLRLVFDEYLKTT------------------------GKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRMVSRSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKAMKDTIIDIITHRSNVQRQQIRQTFKSHFGRD--------LMTDLKSEISGDLARLILGLMMP---PAHYDAKQLKKAMEGAG----TDEKALIEILATRTNAEIRAINEAYKEDYHEDALSSDTISLATGHREEGGENAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDIEKYDKSL |
8 | 7abir | 0.12 | 0.11 | 3.92 | 1.33 | SPARKS-K | | DAAEGVMLNTERLIKHAVQERLAVIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAP--------------TSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELRPLLRLVCKKFFFVDMCVQAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDD-GVQFHAFGRVLSG--TIHAQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSE------------LPKMLDGLRKVNKSYP-------SLTTKVEESGEHVILGTGLDCVMHDLRKMYSEADPVVTFCETVSSLKCFA-------ETPNKKNKITMIAEPLEKGLAEDIENEVVQI-----TWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDK--ALLGSVKDSIVQGFQWG---TREGPLCDELIRNVKFKILDAVVAQEPLTARRVVYSAFLMATPRLMEPYYFVEV |
9 | 6gauA | 0.05 | 0.05 | 2.28 | 1.79 | MapAlign | | GLHHLIWEVVDNAVDEIPVATHASGIPTVDVVMTQLGVSGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFVVVNKAVSSAQARIAARKARELVRGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGLADAVFWALDAYKTGRGSIRMRGVVEVEEDRTSLVIIEDQSSDRVLRIVIEINMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRL----------------------RKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILA |
10 | 5gncA | 0.06 | 0.06 | 2.40 | 1.00 | EigenThreader | | PGLKKLLKWADAETVFTRLRLNTDFPVWAAYTRSVAQTDSEASAVVSRYSDEVLSGIAAAKKSSKTESIATKLETEQRTWLAAKKTPDDFLVFKLNKAGDDILSSPLLSAWTNYKLSNKENPKAQ-----TTLIATTKHYGDSGVSQILAAARKSPATQSTAKRLEAEQVQLWLKK-----------------------------------GRTPDDTFTLLSLDRAGDDLLASPQFNTWKYINYYNKENPDEKTTVLAKLTHFDDEELTPILVVARKVPSTESTAAKLQAEQFKNWLSADKSPEEAFTLLQLDLKYTENFNLNKEINEQVTAIQVFRAQYVDDSRIANAIAKRVEDELFKGWTVVLNKPDDVFINLKLETVGENVFESPLWSFYTKFLEKYNTANPGKEQTISGLARGYNDVTLTNLLKAKEAPSTKTLATKLEDELVQYWLADKKLPDKLFGYL-----------------ELKESVDGILTNPVFNVWLKYLAPVKKALIDTLKSAFGDVAVSNLFAAKKDPGTAKVAATLQTALLSKWVLEKKTSAILKEGAGADVSAKLLATYSAKFKVRWG------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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