Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCSSSSSSCCCCCCCSSSSSSSCCSSSSSSSSSSCCSSSSCCCCCCCSSCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCSSSSCCCCCCCCC MAENNENISKNVDVRPKTSRSRSADRKDGYVWSGKKLSWSKKSESYSDAETVNGIEKTEVSLRNQERKHSCSSIELDLDHSCGHRFLGRSLKQKLQDAVGQCFPIKNCSSRHSSGLPSKRKIHISELMLDKCPFPPRSDLAFRWHFIKRHTAPINSKSDEWVSTDLSQTELRDGQLKRRNMEENINCFSHTNVQPCVITTDNALCREGPMTGSVMNLVSNNSIEDSDMDSDDEILTLCTSSRKRNKPKWDLDDEILQLETPPKYHTQIDYVHCLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVRVLRIDAPEQQC |
1 | 1vt4I3 | 0.04 | 0.04 | 2.05 | 0.77 | CEthreader | | MAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------ |
2 | 7dn3A3 | 0.04 | 0.03 | 1.83 | 0.72 | EigenThreader | | APLLYGVLDHRMGTSEKDRPCETCGKNLADCLGHYQMICKTCCHIMLSDYLKRPGLTYKKISDKCRKKNICHHCGAFNGTVKKCGLLKINPLVVLNLFKRIP-----AEDVPLLLMNPEAGKVPDVIKKHRIKGKQGRFRGNLTVISPDPNLRIDILTFPEKVNK-----ANINFLRKLVQ-----NGPEVHPGANFIQQRHTQMKRFLKYGNREKMAQELKYGDHLPQTEEAKAEALV--------LMGTKA----NLVTPRNGEPLIAAIQDFLTGAYLLTLKDTFFWTGKQIFSVILRPSDDNPTKGKQYCCANDSYVTIQ-----NSELMSGSMDKGTLGSGSKNNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFRYMQRRLVKSLEDLCSQYDLTVRSSTGD---------IIQFIYGLDPAAMEGKDEP |
3 | 2izvA | 0.96 | 0.35 | 9.94 | 1.33 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVR----------- |
4 | 6l7eA | 0.06 | 0.04 | 1.84 | 0.67 | DEthreader | | --STLSLS--NREQASNLELSQFQLITKVYRI----GE--------------------------TLNTADISQ----------EYNQYSFLLKLNKAIRLSRATE---------NTDVLGKVF-TKYYM----QRY---AIHAETALILCASYIGKLILDLIKLNTITSWLHTQKW---------------SVFQLFIMTSTSAAQLEMVYSTGLTRFADWVALALAMLDANLLQVAPQGVSALLQWEALSRAALSTYYIRQAAAAGQKNQCNMN-GKLGDKF----PVYQ----S--GN--TSGLNQGRLLFKVEAWI-----------------GAKR-------AAIGDDY--A--TDSLNKPDDLKPVEINTAISPAKVQTADDVQPSPSFDEMNYQ-------DVTFTAFARKLGY------------------- |
5 | 2izvA | 0.96 | 0.35 | 9.94 | 1.49 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVR----------- |
6 | 1vt4I3 | 0.04 | 0.03 | 1.83 | 1.29 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------GGGGGGGGGGGGGGGGG------------------GGGGGGGGGGGG |
7 | 2izvA | 0.98 | 0.35 | 9.93 | 3.71 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSMLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVR----------- |
8 | 5nd1B | 0.17 | 0.15 | 4.95 | 1.08 | SPARKS-K | | SDQSQETRSPTSDVQTSVHDKPTLKGSDGTG-------IHEATGLPID-------KRGEVPTVQLER--TAESIAKMMDLLRSEKFTAAALQQEFQNIVACAAPQMTVNAGRFYLYSGKRVVALEPLTITLSSTQDNSDSAKLFALAVSQVAPMLQTVAQ------------EQTFRARVERDGFDSAAKRSRHQTDFAVKGMLTPHGMDWAGVQTYSASAMETTTDRVRADYAGRMVVHSTLRKQTLRSRGTGDTTETENSGR-----YLLAL-PAGVAAAALALTWGKPK-------LGGAGHANLTAVMSAGVGYITGVNGTRFGREELVYLLGFALRHMADAQEQV---IRNVLAQVASLFRPAACSAHEWMLMPKVSRPMNEPLRQLAQQITVNCTIYQGITDGDLQKDLYHHLFQYATTTYADGVQVMQANTRM |
9 | 2izvA | 0.96 | 0.35 | 9.94 | 1.12 | MUSTER | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVR----------- |
10 | 2pffB | 0.04 | 0.03 | 1.86 | 1.16 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDILTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKITQPALTLMEKAAFEDLKSKGLIPADA----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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