Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
| | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCHHHHHHHHHHCCCSSSSSSSCCCCCCCCSSSSSSCCHHHHHHHHHHCCCSCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCC MTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEENLSTKTEAV |
1 | 2mkcA | 0.25 | 0.05 | 1.64 | 1.27 | CNFpred | | ----------------------------------------------------------------NAYIYIGNLNRE-LTEGDILTVFSEYGVPVDVILSRDTGESQGFAYLKYEDQRSTILAVDNLGFKIGGRALKIDHTFY---RPKRSLQKYYEAVKEELDRDIVSKNNAEK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 7ko4P | 0.12 | 0.06 | 2.28 | 1.49 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKAISEELDHALNDMTSI------------------------------------ |
3 | 3h0gA | 0.07 | 0.07 | 2.80 | 1.18 | MapAlign | | MDESGQRPRVGGLLDPRLGTIDRQFKCQTCGETMADCPGHFGHIELAKPVFHIGFLSKIKKILECVCWNCGKLKIDSSNPKFNDTQRKTKMVCDTGLSAGPSANMGHGGCGAAQPTHISSEDLAHLGLNEQYARPDISVDGTSRGEDDLTHKLSDIIKANANVRRCEQMNIMLWVPDWDGILPPPVILKPKVLWTGKQILSLIIPKGINLIRDDDKQSLSNPTDSGMLIENGEIIYGVVDKKTVGASQGGLVHTIWKEKGPEICKGFFNGIQRVVNYWLMKEVTRTVESFEAKVSRILNQARDNAGRSDIINGLNELILNKVAFEWIMGEVEARFQVGTLAAQSIGEPATQMTLNYMMEHKIVRQIEDGTFERADEWVLETDGINLTEAMTVEGVDATRTYSNSFVEILQILGIEATRSALLKELRYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMDAAASGEKDDCKGISENIMLGQLAPMGTGA------ |
4 | 6yvuB | 0.07 | 0.07 | 2.82 | 1.47 | SPARKS-K | | SFDVAISTACPRLDDVVVDTVECAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPENVP-----RLFDLV--KPKNPKFSNAFYSVLRDTLVAQNNVAYGKKRF--RVVTVDGK-----------LIDINHVAKGLMKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEERDHEPDLESQISKAEMDSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDIKGLQDEIMKIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETNVDIGARRLAKLDLNNAVQKRDEVKEQLGILKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAELELVDSLDPF |
5 | 4p6qA | 0.17 | 0.04 | 1.16 | 1.26 | CNFpred | | ----------------------------------------------------------------TNCVWLDGLSSN-VSDQYLTRHFCRYGPVVKVVFDR----LKGMALVLYNEIEYAQAAVKETGRKIGGNKIKVDFA--------------NRESQLAFYHCMEKSGQDIRDFYEMLAERREER--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2qf7A | 0.05 | 0.05 | 2.16 | 1.13 | MapAlign | | EYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDDYGRITAYRSASGFGIRLDGGTSRYYDPLLVKVTAWAPNPLEAISRMDRIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAVENMRVSMDAIAEENKL----------------------------------CEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVDMAGLLKPAAAKVLFKALREANTSQPCLGSIVEALWIRRISFYWEAVRNQYAGQFTNLKEQARSLETRWHQVAQAYADANQMFSSKVVGDMALMMVSLTVADVVSPDREVSFPESVVSMLKGDLGQPPSGWPEALQKKALKGEKPYTVRPGSLLKEADLDAERKVIEKKLKVFTDFALASDTYGPVSVLPTPAYFYGLADGEELFADIEKGKTLVIVNQAVSATDSQGMVTVFFELNGQPRRIKVPDRAHGAT |
7 | 2f9dA | 0.19 | 0.04 | 1.27 | 1.09 | CNFpred | | ----------------------------------------------------------------NRILYIRNLPYK-ITAEEMYDIFGKYGPIRQIRVGN-TPETRGTAYVVYEDIFDAKNACDHLGFNVCNRYLVVLYY-NANRAFQKMDTKKKEEQLKLLKEKYGINTDPPK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2pffB | 0.05 | 0.05 | 2.32 | 1.08 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINEHSTSYTFRSEKGLLSAQFTQPALTLMEKAAFEDLKSKLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVLQKSLSLEEVEGHLFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
9 | 6ianC | 0.09 | 0.07 | 2.68 | 1.42 | SPARKS-K | | ---------------------------------------------EPSEEEVLQYIVDNVNKLLSRHYSLVEFDAIQGTLQILADIFGTLSP----AQQIDGV----------APTDEAAASLEFLTKTLGYR------------VLADSFPTSFSTVIYPTLYWVLSKRVYLARFLQRLE---IPEALAQDEDVRALYQQYVNLRGFVNTHRRVDALRTAHADPADARRAVTVLEEECDRLRGYIQVAEKKLAGVPDKEALLNACKSLRAALEEESRLAEKGVELQQQLISSRQRSTENRLQNLRRDAARRLRDEIQTNKPKELQQKQRENAEFDRLISLTTENQQLDEALKKLHQQVKERQKPGEDGSTIATIKQQVERVAKRKVEV-------------------EQLTGLQADNSRTLNDIRERENRIEQLREAHHLKDDREFSKQVLAKKAATESRTHLSEQRVEYGVLNFTENV---------------------------- |
10 | 2uvcG | 0.05 | 0.05 | 2.36 | 1.03 | MapAlign | | SVREPSQSAKLVKTVEIKLVGDNEIALTLFEGRTAEGGVVPLTFRFTWKAITKPIFPRKIDGDLLKLVHLSNGYRMVPGAEPLKVGDVLDTTAQINAVINQDSGKMVEVCGTLKRDGPVMYVTSQFRFKNKNVYSSVQTSVDYEAGESHGNPVIDYLGMYTSAAVRSLVETWAAENNIGRVRSYHVNMVGMVLPNDAITVKLEHVGMIAGRKIIKVDARNKDTDESVLQGEAEVEQPVTAYVFTGQGSQEQGMGMDLYATSPVAKEVWDRADKHFRENYSPSGLLSTQFTQPALTLMEKASFEDMLGEYSALVALADVMPIESLVSVVFYRGLTMQVSPTFTEQALQYVVENIAEVTGWLLEIVNYNVANMQYV------AAGDLRALDTLANVLNILKMQKIDIQALMQSMSLEDVRAHLVEIIQECRKQTVPFHSTFLRSGVKPFRSFLLKKINKTTIDPSKLIGKYIPNVTAKPFEISKEYFEEVHRLTGSPKIANILANW---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|