Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
| | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCSSSSSSSSSSCCC MAASALRGLPVAGGGESSESEDDGWEIGYLDRTSQKLKRLLPIEEKKEKFKKAMTIGDVSLVQELLDSGISVDSNFQYGWTPLMYAASVANAELVRVLLDRGANASFEKDKQSILITACSAHGSEEQILKCVELLLSRNADPNVACRRLMTPIMYAARDGHTQVVALLVAHGAEVNTQDENGYTALTWAARQGHKNIVLKLLELGANKMLQTKDGKMPSEIAKRNKHHEIFNLLSFTLNPLEGKLQQLTKEDTICKILTTDSDREKDHIFSSYTAFGDLEVFLHGLGLEHMTDLLKERDITLRHLLTMREDEFTKNGITSKDQQKILAALKELQVEEIQFGELSEETKLEISGDEFLNFLLKLNKQCGHLITAVQNVITELPVNSQKITLEWASPQNFTSVCEELVNNVEDLSEKVCKLKDLIQKLQNERENDPTHIQLREEVSTWNSRILKRTAITICGFGFLLFICKLTFQRK |
1 | 6bcuA | 0.07 | 0.05 | 2.24 | 0.83 | DEthreader | | ----------------------------------------VVITDPRLL-QAENLQAL---F--VA---LNDQVFEIRELAICTVGRSVMPRKMLIQILTESRIKEQS---ARMLGHLVSAPRLIRPYMEPILKALILKLPGVINN--VLATIGELAQVSGLEMRKWVDELFIIIMAKRQVALWTLGQLVAS-TGYVVEPYRKYPTLLVLFTRRAIRVLGLGHMSEIRQIWWERLQ---------GCQRI-DWRTWLKYASATLLLPTYAYMKNMWK---------HKLMARCFLKLGEWQLNLQGINTIPVLQYYAAWGFRSISNQDTLLANDPTSKLSNYTRTAMEVTGLDGNYRITCHTVMEVLREHKDSVMAVLE-AF----YDPLL--------ALNKKAIQIINRVRDKGRDFSHDTLDVPTQVELLIKQATSHENLCQCY--WCP----------------------- |
2 | 6molA | 0.21 | 0.17 | 5.49 | 1.40 | SPARKS-K | | -----------DLGKKLLKAARAGQDDEVRILMANGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYLNGATPLHLAARMGH-----VEIVEVLLKYGADVNAQDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGGHLEIVEVLLKYGADVNAVDAA---GGTPLHEAARAGH-LEIVEVLLKYGADLHKAARAGHEVLLKYGADVNAATPLHLAALILLKNGADVNA-----SDITGTTPLHLAATMIVEVLLKLHLAARMIVEVLLKYGADVNAQDKFGKTAFDISIDNEDLAEILQAAALE--------------------------------------------------------- |
3 | 5vkqA | 0.15 | 0.15 | 4.95 | 0.71 | MapAlign | | --RLKADGRGKIPLLLAVESGNQSMCRELLAAQTAEQLKATTANGDT-ALHLAARRRDVDMVRILVDYGTNVDTQNGEGQTPLHIAAAEGDEALLKYFYGVRASASIADNDRTPMHLAAEN-----GHAHVIEILADKFKFINSKSRVGRTALHLAAMNGFTHLVKFLIKHNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFCAHIAAMQGSVKVIEELMKFDRSGVISARNKLTDATENKAGFTAVHLAAQNLTPLHVAAYVLVSPAPVDTAAKL-SNIYIVLKDLVAAGKQCEAMATELLAPVWIGFTFPMGHKFNKVPIIKFMSYLTSHIYLYEVGLLIWLSGLLLFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVFGFSMHI--- |
4 | 6molA | 0.22 | 0.19 | 6.13 | 0.39 | CEthreader | | MANGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNQDAAGGTPLHEAARAGH-----LEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVGTPLHKAARAGHLEIVEVLLKYGADVN---ATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADV---------NAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQAAALE------------------------------- |
5 | 6molA | 0.22 | 0.20 | 6.30 | 1.51 | MUSTER | | AGQDDEVRILMANGADVNATDIWDAT----------------------PLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGH----VEIVEVLLKYGADVNAQDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGTPLHEAARA--------------------HLEIVEVLLKYGADVNAVDAAGGTPLHEAARAVEVLLKYGADNAVGTPLHKAARAGHLEI--VEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNTGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQAAA |
6 | 4oauC | 0.16 | 0.15 | 5.01 | 0.97 | HHsearch | | -DNHLLIKAVQ-NEDV------D--LVQQLLEGGA--NVNFQEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDYGFTAFMEAAVYGK-----VKALKFLYKRGANVNLRRKGGATALMDAAEKGHVEVLKILLEMGADVNACDNMGRNALIHALLSSDEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEEHIEINDTDSD---GKTALLLAV------------ELKLKKIAELLCRGASTDCGDLVMRNYDHSLVKVLLSHGAKEDPEDWKPSWGAALKDLHRIYRDEKYKIADTSEIYLFYEKQEVAVKTFCRAQREVSCLQSSNSHLVTFYGSRGHFVCVTLCTLEACLDVHRGERNVLSSIFKAVQELHLSC-GYTHQDLQHLADFDKSIKWAG-DPQEVKRDLED---LGRLV-LYVVKKGSI |
7 | 6ndzB | 0.33 | 0.13 | 3.98 | 2.15 | FFAS-3D | | -------------------------------------------SELGKRLIMAALDGNKDRVKDLIENGADVNASLVSGATPLHAAAMNGHKEVVKLLISKGADVNAQSAAGSTPLAAAAINGH----KEVVKLLISKGADVNAVTAAGMTPLHAAAANGHKEVVKLLISKGADVNAKADRGMTPLHFAAWRGHKEVVKLLISKGADLNTSAKDGATPLDMARESGNEEVVKLLEKQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 4o1oA | 0.18 | 0.16 | 5.21 | 1.23 | EigenThreader | | ----------------------------------------SLEEMLTQAVQEA----DIEQVRQLLERGADANFQEEWGWSPLHSAVQMDSEDLVALLLKHGADPCLRKNGATPFIIAGITGN-----VRLLQLLLPNVEDVNECDVNGFTAFMEAAVYGRVEALRFLYENGADVNMHRKGGATALMDAAEKGHVGVVTILLHAMAEVDARDNMGRNALVYALLGKAKAITRLLLDHGADVNVRGEGSKTPLILAVERLEQEQIEVNDTDREGKTALLLAVEL---RLEEIAKLLCHRGAST--NCGDLVAIARRNYDSDLVKFLRLHQEVSCLQSSRANDNVVTANHRGDAVILSSLFKAIGELHRSGEALGLLVLYVVKKGDISFETLKNQSFEEVIQGSLSSLESRYRTLRDVGNDIKTILQLLQPGTLSTSFAQWTTKIDSFVMEEMNAKFIRNLGEHIKNKKMKSIIGEP |
9 | 5y4dA | 0.20 | 0.15 | 4.77 | 1.65 | CNFpred | | ------------------------------------------------PLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTDGLTPLHCAARSG-----HDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITES---------------------------GLTPIHVAAFM-GHLNIVLLLLQNGASPDVTNIRGETALHM-----AARAGQVEVVRCLLRNGALVDARAR--------EEQTPLHIASRLGKTEIVQLLLQHM---------------AHPDAATTNGYTPLHISAREGQVDVASVLLEAG------AAHSLATKKG----------FTPLHVAAKYGSLDVAKLLLQRR |
10 | 2qj0A | 0.05 | 0.04 | 1.75 | 0.83 | DEthreader | | -DILQIICRNQQKRITKNKPNAESLHSTFQEIDVIGVVALQDLNAVFPTLLEYCNFYVLTIFELFVTFIAIFTKFFADYFTILGPILSLSVIDRLFFIVDKLVRRTDISYFAHIANKNHRLSSNG-FS-NITLLLVRFSQFLIDYFIDLFLTLTYLHGGTLSFLQLEVFDFCGASFLFKYYPEFVVEGPV-NYSLYISKILFVEFTVLRCPELVSNPLKVKTGSQFYDFNSRYSISIILYQLFVRFVAR-LNDLTFLLDEGLSNLAEVHN-------SCGLADKSKLENLESLVGPKCGE----------------PKD--LLKALTTVYINLSEQSEF--------------------ISAVAKD-F----------PEF-------------------------------EEQRKADEEEDLEYGDVPDEFLDPYTI------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|