>Q8WW52 (318 residues) MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLG QISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIY SDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGP NMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQ RVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYD IFEPLLSQFKQLALNATR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYDIFEPLLSQFKQLALNATR |
Prediction | CCCHHHCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCSSSSSSCCCCHHHHHHHHCCCCCSSSSSSSSCCCCCCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHCCCSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSSHHHHHHCHHHHHHHHHCCCCCSSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSCCHHHHHHHHHHHCCCCC |
Confidence | 962110678775266306799999999999999863387767667898179999998725666667224599700388999999971687379887873135778888844534899887767699999999972897589860457788999999999875166568769860135699998876648999999999869981993342378889887776579999999999961599736754067775129999999943898069998279998799999999983798669986888999999986314899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYDIFEPLLSQFKQLALNATR |
Prediction | 720353045442210000011110111011100001333434344222433002101523514453024010001013363035005461100001010222434654420000021545240103300430163342000010232500420141045127625041000000000303736444403163015204720350000000003225626545103610430251056171200000000003401620230054054100000025624131620230064053520000024602540462456678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCHHHCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCSSSSSSCCCCHHHHHHHHCCCCCSSSSSSSSCCCCCCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHCCCSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSSHHHHHHCHHHHHHHHHCCCCCSSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSCCHHHHHHHHHHHCCCCC MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYDIFEPLLSQFKQLALNATR | |||||||||||||||||||
1 | 1xrsA | 0.06 | 0.05 | 2.17 | 1.00 | DEthreader | -------------------------------S--KE--EKIKNNRSIR-E----SRFEEYGD-KSGPL-LYVIVATGNIEDITQAVAAKADVIAVIRQSLLD-----YVPYGAT-EGFGGTYATQENFRLMREALDYIRLCNYCSG-LCMPEIAAMGA-I----ER--LDVMLNDALYGI-LFRDINMQTMIDQNFSRIINFGVIINTGENYLTT--ADAFEEAHTVLASQFINEQLLPEQMGLGHAFEMGFYELSQAQMAREIFKAPLKYMPPTKFMGIQDALFNMVTIMTNQ-RIHLLGMRLSIENAQYIFNNMES | |||||||||||||
2 | 2pz0B | 0.13 | 0.08 | 2.83 | 1.12 | HHsearch | ------------------------------------------------------------------MKTLVIAHPENTIAAFKRAMELGADGIELDVQLTK------DGHLVVIHDETVDRIPTLYEVFELIGD-KDFLVNIEIKSGIIEEKLIKAIKEY----NFEERVIISS-------------FNH-YSLRDVKKMAPHLKIGLLYQCGLV-------EPW-------HMALRM-EAYSLHPFYFNI--IPELVEGCK--KNGVKLFPWTVD-R---KEDMERMI-KAGVDGIITDDPETLINLVRKGG----- | |||||||||||||
3 | 3kozA1 | 0.05 | 0.04 | 1.91 | 1.00 | DEthreader | -----------------------------------------TPKRRGW--TWRQPASTPLEDPQPLPV-ITTEIASGREDDIRRMRMAWADHIMVIRQSHYD-----GLIEGTP-QGIGGVPITRKQVRAQRKALDPINYHSYVSGVA-GPDIAVMFAEE-----G--VNGAHQDPQYNV-LYRNINMSFIDACESKTIMWADMAQIDGANANATA-REAWKVMPELMVQHALNSILMKSNICLSTVPPTSMLDLPYAVALREFEGYRMRAQMNTMEEAVTHVLNLLISKLTRA-DIQSTITYEACDTAKQALIGMDG | |||||||||||||
4 | 2f9rA | 0.14 | 0.10 | 3.42 | 0.60 | SPARKS-K | --------------------------------------------------------------ADNRRPIWNLAHMVNAVAQIPDFLDLGANALEADVTFKG-------SVPTYTYHGTCIRWEYFNVFLKTLREYGFILFVLDLKTRPAGENVAKELLQNNGNNGGRAYVVLSLP-----------DIGHYEFVRGFKEVLKKVGYDFS----GPYLPSLPT-----LDATHEAYKKAGVDGHIWLSDGLTLGDMARLKEAIKSRDSNKIYYWSVDK----VSTTKAALDVG-VDGIMTNYPNVLIGVLKES-GYNDK | |||||||||||||
5 | 1nthA | 0.05 | 0.04 | 2.08 | 0.82 | MapAlign | ------PTDKDMMEKLFKAGFEMLLECGIYCTHRIVKYTEDEIWDAINNVQKEFVLGTGRDAVNVRKKPIVQGGPIVFMPVHMSYALEEVDTIVNGVMVRPIPKSPYELAAKTE----------TRLIKNACAMAPGMGVKGPETSAQGNISADCGGM--------TCTDSHEV-SQLNEL---KIDLDAISVIAHYKGN--SDIIMDEQMPIFGGYAGGTVD-VATHINAVLMS--SASWHLDGPVS--TNETLMIAGWACADI-LSGNQYYPCPCTEMCLLEASAQSITDGREILSGASAGMEARMMGEVARATAG | |||||||||||||
6 | 3qvqA | 0.12 | 0.08 | 2.87 | 0.56 | CEthreader | ------------------------------------------------------------GQSAYSFLPQVIAHPENTLASLHLAGQQGIKWVEIDVIFHDDYLSRTTDGDGLIYKTPLETIPTLLEAIEVISQYGGLNLELKPCEEETIAASVEVLKQHWPQDLPLLFSSFN-----------------YFALVSAKALWPEIARGYNVSAIPSA---------------WQERLEHLDCAGLHIHQSFFD--VQQVSDIKAA--GYKVLAFT----INDESLALKLYNQG-LDAVFSDYPQKIQSAIDSHI----- | |||||||||||||
7 | 1h7wD2 | 0.09 | 0.08 | 3.07 | 0.44 | MUSTER | ISVEAGLK--INPFGLASAAPTTSSMIRRAFEAALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISTAAYWCQSVT--------------ELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLGMGLACGQDPELVRNICRWQAVQIPFFAKL---------TPNVTDIVSIARAAKEGGAD-GVTATNTVSGLMGLKADGTPWPAVG------AGKRTTYGGVSGTAIRPIALRAVTTIARALPG--FPILAT-GGIDSAESGLQFLHS-GASVLQV--IKDVIGKALQYL----- | |||||||||||||
8 | 2oogD | 0.11 | 0.07 | 2.61 | 1.09 | HHsearch | ----------------------------------------------------------QWHTNLTNERFTTIAHPEHTFQAYDKSNELKASYIEIDLQRTK------DGHLVAMHDETVNKVPTLDEILERYG--PNANYYIETKSPGMEEQLLASLKKH---HLLNGHVMIQ-------------SFSD-ESLKKIHRQNKHVPLVKLV--DKGE---LQQFNDQRLKEIRSY------AIGLGPDYTD--LTEQNTHHLK--DLGFIVHPYTVN-E---KADMLRLN-KYGVDGVFTNFADKYKEVIKEG------ | |||||||||||||
9 | 4oecA | 0.17 | 0.11 | 3.63 | 0.77 | FFAS-3D | ---------------------------------------------------------------ERDRVIV-LGHPENTLLAFRKAVEAGADGIELDVWL------TKDGRVVVMHDETIDRDMTLEELLEEVFEPRNALVNVELKDRDAAREVAEIVAENNPE-----RVMISS--------------FDIDALREYRKYDDETTMGL------------LIDREEVVPLIPKLKDELNLWSVNVPMEAIPLIGLEKTLQALHWVLGLKVVLWT-ENDVLFYKDDNLAKLKGLFEVVIANDVVRMIEYLKK------- | |||||||||||||
10 | 3qr0A2 | 0.11 | 0.08 | 2.86 | 0.65 | EigenThreader | ------------------------------------PMHRLDLGANMKL------------TLAAYYINSSHNTYLSSVEIYRQVLLTGCRCLELDCWD------GKDGEPIITHGFTMCTEVLFKDVVYAIAESAFKVLSFENCSVAQQKLLAQYCNEAFGELLLDKKILIKNKKMDAGTAAKEAEAAEEMSA------LVNYIQPVHF------------TTFEQAQKKD------RHYEMSSMVETQALNKLKDNEDFVDYNKKQITRIYPRVDSSNYV--PQIYWN--AGCQLVALNFQCAMCVNLGVFEYNGC | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |