Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCSSSCCCCSSSSCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVPQASEILAKMSELVHRRLRHGSSSYPPVIYSPLVDGESDPNKTTCEACNITFSRHETYMVHKQYYCATRHDPPLKRSASNKVPAMQRTMRTRKRRKMYEMCLPEQEQRPPLVQQRFLDVANLNNPCTSTQEPTEGLGECYHPRCDIFPGIVSKHLETSLTINKCVPVSKCDTTHSSVSCLEMDVPIDLSKKCLSQSERTTTSPKRLLDYHECTVCKISFNKVENYLAHKQNFCPVKVFSEAAQLIATKEENRHLFLPQCLYPGAIKKAKGADQLSPYYGIKPSDYISGSLVIHNTDIEQSRNAENESPKGQASSNGCAALKKDSLPLLPKNRG |
1 | 4btgA3 | 0.10 | 0.09 | 3.45 | 1.37 | SPARKS-K | | FNLKVKDLNGSA-----RGLTQAFGELKNQLSVGALQLPLQFTRTFSASMTVRVGRTATYVVSSVLTLGRLWSPST-PKELDPSARLRNTNGIDQLRSNLALFIADMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINEYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPPIGNTRGTVNSNGAEMT---LGFPSVVERDYARD---PMVAIAALRTGIVDESLEARAYAAVMHYAVAHN---PEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPYNKPIQPSEVLQAKVLD |
2 | 1vt4I3 | 0.04 | 0.04 | 1.95 | 1.37 | MapAlign | | --NDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
3 | 1fu9A | 0.33 | 0.04 | 1.07 | 1.76 | HHsearch | | ------------------------------------GSAAEVMKKYCSTCDISFNYVKTYLAHKQFYCKNKP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5v3jE | 0.10 | 0.08 | 2.88 | 0.72 | CEthreader | | PSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEK---PHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKEC--GKGFISDSHLLRHQSVH----------------------TGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQ-------KVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------- |
5 | 6tntJ | 0.05 | 0.05 | 2.43 | 0.58 | EigenThreader | | RKLDKLYEACRYLAARCHYAAKEHQQALDVLDMSQSSIKSSICLLRG---KIYDALDNYSYKEALKLDVYCFPLSKLCKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDA----LEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYH |
6 | 3c5bA | 0.09 | 0.08 | 3.12 | 0.46 | FFAS-3D | | MALIGQTLPS----LLDIYNRTDKNGRIARIVEQLAKTNDILT-------DAIYVPCNDGSKHK--TTIRAGIPEPVWRRYNQGVQPTKTQTVPVTDTTGMLYDLGFADRSNNAAAFRVSENMGKLQGFNNKVARYSIYGNTDAEPEAFMGLAPRFNTLSTSKAASAENVFSAGGSGSTNTSIWFMSWGENTAHMIYPEGMVAGFQ-HEDLGDDLVSDGNGGQFRAYRDEFKWDIGLSVRDWRSISRICNIDVTTLTKDASTGADLISMMVDARDVAMLGDGKEVIYANKTIH---AWLHKQAMNAKNVNLTIEEYGGKKIVSFLGIPIRRVDA- |
7 | 6ezoI | 0.08 | 0.08 | 3.03 | 1.18 | SPARKS-K | | PRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQ------------------IKEHLLKSKWCRPTSLNVVITSELYRSLGDVLRDVDAKALVRVYGDVISNINITRALEEHRLRRKLEKNVSVSSPSHPTRCHEDNVVVAVDSTTNRVLHFQKTQGLRRFAFPLSLFQGSSDGVEVRYDLLDCICSPQVLLVNEEILGNQIHMHVTAKEYGARV--SNLHMYSAVCADVIVYPLTPRHNIYRGPEVSLGHENVLLGSGTVIGSNCFTNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAKERVTLKPRSVLTSQVVVGPN--ITLPEGSVI |
8 | 5t45A | 0.07 | 0.01 | 0.60 | 0.27 | CNFpred | | ---KFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFIL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6h3iA | 0.06 | 0.04 | 1.81 | 0.67 | DEthreader | | ------------TRLEVLTTNEYTFN-------------------------------------------------QIPQAY----DFRLNDYNNDPQGDGFFDVFFKNKLNVSIRFGFFYQVEIPLKVTLVWMD---RA-DIKGEVWFN---LRL-LGANERDREDVQVIYTK------E-EDEQRQNANNNIVRNFFNIWDDYLDIGTPNQHAQQDYMWQRSSTFSGNT--IQNSNSN-TLT--INY-T--KN--SGTVLPY-S-PSLGFV----------EAAKRGLSFTQVNYGMINVNSEVNEGQNKAVIST-FPLTNIR-SGFTLRYN-F |
10 | 7c72A | 0.05 | 0.05 | 2.29 | 1.29 | MapAlign | | TVIHLRGGHRTELLQAPWDARTRVHEYGGRSYLPIRTAEGWSVVFSNYDDQRLHRLDPKPYPLTPLPAVPAGLRYYVLSPDGTEVWCVCEGHIAAVTGIRRAIVAIPLDGRAAEDAGAIRELVAGAQFYASPAPSPGGGHLAWVQWNHPRMPWDGTEVRVAAVEDGRTVAPRTVKGGLKESALAPLWRDEESLYVISDWPGWWNIYQVRLAVLHGGDLRLGVYDPETLDLVDLEVPYEHWAVVGIGGGPDLPASVVRVDTTTGRVEGSRPRAERLDGPFGRPVHAYVFPPTNPEAAAPEGELPPYVVFVHGGPTGRVSTVLDLERVYFTSRGIGV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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