Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCSCCCCCCCCCCCCCSSSSCCCCSSSSSSCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCHHHHHCCSCCCCCCCSCCCCCCSSCCCCHHHHHHCHSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCHHHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCCCHCHHHHHCCCCCCCCCCSCCCCCCSCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCSSSCCCCCCCCCCCCCCCCCCSCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSRRKQSKPRQIKRPLEDAIEDEEEECPSEETDIISKGDFPLEESFSTEFGPENLSCEEVEYFCNKGDDEGIQETAESDGDTQSEKPGQPGVETDDWDGPGELEVFQKDGERKIQSRQQLPVGTTWGPFPGKMDLNNNSLKTKAQVPMVLTAGPKWLLDVTWQGVEDNKNNCIVYSKGGQLWCTTTKAISEGEELIAFVVDFDSRLQAASQMTLTEGMYPARLLDSIQLLPQQAAMASILPTAIVNKDIFPCKSCGIWYRSERNLQAHLMYYCSGRQREAAPVSEENEDSAHQISSLCPFPQCTKSFSNARALEMHLNSHSGVKMEEFLPPGASLKCTVCSYTADSVINFHQHLFSHLTQAAFRCNHCHFGFQTQRELLQHQELHVPSGKLPRESDMEHSPSATEDSLQPATDLLTRSELPQSQKAMQTKDASSDTELDKCEKKTQLFLTNQRPEIQPTTNKQSFSYTKIKSEPSSPRLASSPVQPNIGPSFPVGPFLSQFSFPQDIT |
1 | 5v3jE | 0.16 | 0.08 | 2.76 | 0.59 | CEthreader | | -------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLS-----LHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRP---------HKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------------------------------------------------------------------------------------------------- |
2 | 6gmhQ | 0.07 | 0.07 | 2.73 | 1.08 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------GGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------VEAMQ----------AESCYQLARSFHVQEDYDQAFQYYYQATQFAPFFGLGQMYIYRGDKENASQCFEKVLKAYPMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDQILEQTDIQGDVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEISVTTSYNLARLYEAMCEPNYVDCYLRLGAMARDKFKEALQINQDHPDAWSLIGNLHLAKQEPGQKKFERILKQPSTQSDTYSMLALGNVWLQTLHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQY |
3 | 6ml2A | 0.25 | 0.06 | 2.01 | 1.11 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKSFTCDQCGKYFSQKRQLKSHYRVHCSHCHRKFMDVSQKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEK---------PYSCSICGKCFSDSSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIHS-------------------------------------------------------------------------------------------------------------------------- |
4 | 6e5oY | 0.12 | 0.09 | 3.30 | 0.92 | SPARKS-K | | LKEMDEKEFYACEIQLQKWYGDLRGNPVEAENRVVDISGFSIGDGHSIQYRYLENGKREFYLLMNYGKKGRIR--FTDGTDIKKSGKGKAKVIDLTFDPDDEIILPLAFGTRQIWNDLLSLETGLIKLANGRVIEKTIYNGRDEPALFVAL---TFERREVVDPSNIKPVNLIGVAR--------------GENIPAVIALTDPE---------GCPLRIGEGYKEKQRAIQAAKEVEQRRAGGYSRK-FASKSRNLADDMVRNSARDLFYHAVTHNLSRGFG--RQGKRTFMTERQY--------TKMEDWLTAKLAYE----------------------GLTSKTYL---SKTLAQYTSKTCSNCG--------------------FTITYADMDVMLV------RLKKTSDGWATTLNNK--------ELKAEYQITYYNRYKRQTVSKWTKGRRDEALFLLKKRFSHRPVQ----EQFVCLDCGHEVHAAEQAALNIARSWLF |
5 | 4ijdA | 0.20 | 0.06 | 1.89 | 2.37 | CNFpred | | -----------------------------------------------------------------------------------------------------GLRIGPSGAGLGVWNEADLPLGLHFGPYEGRITEDEEAANNGYSWLITKGRNCYEYVDGNWMRYVDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGD----------------EYGQELGIKWGSKWKKELM---------KPEIHPCPSCCLAFSSQKFLSQHVERNHS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 5u1sA | 0.05 | 0.03 | 1.53 | 0.67 | DEthreader | | -----------NSIYSLKMWGHINSTVKQHLMIIVASSEIIFFNETNLFADFSTWNDYYLSNLKILA----LQII--------L-K-R--KLVDEYHIELFYLKALTKI--S---K-QYYLNSF--MSENRLLNATNFTRQFDCVIYINIKINDESAA---------------ALLSE-LLGVLSEICIDYKEPKRLNIISVLFNASVL------L--TANLEISNVLI---FFKKIEIFSCLFNYCMLRNDTLSFVFDF--------------------------------------------------------ML-VLYGNIFCLRGIFDLDHLNKYELRVYLLNLDMSFKMYEQLLLPMSL----LKKNKLSQGSRLALLK---------------------------SF-FFQLIKISARDCEFYSKELSRIISDCLFLHRYMTCQNLDNKELHLGKNHNMWKVM-------DRIAAISKLKMLSSTLILTSIHN-AM----- |
7 | 2pffB | 0.07 | 0.07 | 2.86 | 1.82 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTSKAAQDVWNRADNHFKDTYGFSILDIKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVLGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRA |
8 | 5v3jE | 0.18 | 0.10 | 3.13 | 1.20 | MUSTER | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEK-PYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARR---------FECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVH--TGETPYKCKECG------KGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGK-AFIRRSELTHHERSHSGEKPYECKCGKTFGRGSELSRHQKIHT-- |
9 | 2mplA | 0.29 | 0.07 | 2.10 | 1.51 | HHsearch | | -----------------------------------------------------------------------------------------------PWSGPEELELALQDGQRCVRARLSLTEGLSWGPFYGSIQTRALSPERGPAVTLM-VDESCWLRMLPQ-VLTEEAANSEIYRKDDALWCRVTKVVPSGGLLYVRLVTPHGAPRPV-Q-EPVEPGGLA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 4ijdA | 0.16 | 0.06 | 2.08 | 0.49 | CEthreader | | -------------------------------------------------------SEPQDDDYLYCECQNFFIDSCAAHGPPTFVKDSAVDKGHPNLSLPPGLRIGPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANNGYSWLITKGRNCYEYVDGKDKSWDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDEYGQELGIKWGSKWKKELP-------------------------KPEIHPCPSCCLAFSSQKFLSQHVERNHSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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