Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAGAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGSLPLGALYTAAVAAFVLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKEDEEEIGDSQAWEEPTNWSTETWNLATSWEVGRGLRRRCSQAVAKGPSHSLGWEGGTTAEGRLKQSLFS |
1 | 3kcrA | 0.09 | 0.08 | 3.14 | 0.54 | CEthreader | | PVKEITFKEKLKWTGIVLVLYFIMGCI---------DVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQ------MDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRRRIVVNYAKRQQGRRVYAAQSTHLPLKNIQLWGLALYRMGIPILGHYEGGRAVDGIAY |
2 | 6thkA | 0.08 | 0.08 | 3.29 | 0.57 | EigenThreader | | REATRQERVDVMSAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKYYKQDSLSEAVKVLRQELNKQKALKEKEDLSQLERDYRTRKANLQMKVQSELDQAGSAEQWLERATRLVTQAIADKKQLVDEIASLQARLVKLNAETTRRRTEAERKAAEEQATADFYKEVTEKFGARTSEMARQLAEGARGKNIRSLDKQMMAKSLEKFSKGFGVVGKAIDGDWKPFFVKIETLAAGAAASWLVGIAFATATATPIGILGFALVMAVTGAMIDEDL |
3 | 5ncog | 0.13 | 0.07 | 2.46 | 0.52 | FFAS-3D | | -LHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLK----VNMAGVIPAVLLYASAIIFFCFFYTALVFNPRETADNLPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMYFGGTSLLIVVVVIMDFMAQVQT------------------------------------------------------------------------------------------------------------------------- |
4 | 4btgA | 0.14 | 0.13 | 4.32 | 0.78 | SPARKS-K | | VPPTAILEQLRHHITTDFVCHVLSPLGF------------ILPDAAYVYRV---------GRTATYPNFYALVDCVRASDLMLTALSSVDSKMLQATFKAKGALAPALISQHLANVVSSVLTILGRLWKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQR---GRAEVIFSDEELSSTIPWFIEAMSEVSPFKLRPINETTSYIG--QTSAIDHMGQPSHVDWQFAKEPVKLANNSNQRFDVEPGISDRMSATLA-------PIGNTFAVSAFVKNRTAV |
5 | 4u8yA | 0.07 | 0.03 | 1.17 | 0.54 | CNFpred | | ---RATLIPTIAVPVVLLGTFAVLAAFGFSI--------------------------------TLTMFGMVLAIGLLVDNAIVVVENVERVMAEEGLPPKEA---TRKSMGQIQGALVGIAMVLSAVFVPM--------AFFGGSTGAIYRQFSITIVSAM-------------------------------------------------------------------------------------------------------------------------- |
6 | 3qmzA | 0.03 | 0.02 | 1.33 | 0.67 | DEthreader | | ---------M-MFRSVENDTEIKLSFTRDALLSAQVMWTEYLHFNVIVKFYLNSVFISQSNLGRVVV----------------------LEWRD-K--FQGEEYDLLWFGEIAKNLHVV--NRCII--N------WMTKTMSQVANNMVVYFIDGLRALVKLVTAKYQDLQE-----------NQRFVNLELNELTEKERWNTFTLKYDVNYRFDFENMSIMNPFLIIDGEFFDIIRLFSRV-RLVHF--V---E--I--RD----FFPQFNLVEEYSIIHSI |
7 | 1vt4I3 | 0.09 | 0.08 | 3.21 | 0.89 | MapAlign | | ---------LHRSIVDHYNIPKT--------------FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 4ci6B2 | 0.12 | 0.11 | 3.90 | 0.53 | MUSTER | | RITPYYLRELSDLLRTHLSSAAT-------------KQLDMGVVLSDLDTMLVALDKAEREGGVDKQLKSFNSLILKTYSVIGAYILSIVEPSLQRIQKHLDQTHSFSDIGSLMRAHKHLETLLEVLVT-LSQQGQPVSSETYSFLNRLAEAKVTLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRF-DSTRPVVKFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTASIPLLIQLGRSSLMDEHLVEQREKLRELTTIAERLNREREWM |
9 | 2pffB | 0.15 | 0.13 | 4.52 | 0.88 | HHsearch | | NAQLVAIFFELVGDLIKFSAETLSELIRTTLDAEKVFILEENPSNTPDKDYSQGLVAIAETDSESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPESPMLSISNLT---QEQVQDYVNKTNSHLPAG-KQVISLVNGAKNLVSPPQSGLNLTLR-------KAK------APSGLD--QSRIPFSERKLFSNRFLP------VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI---PVYDTFSDLRVISERIVDCIIRLPVKWET--TTQFKATHILDF |
10 | 1vt4I3 | 0.10 | 0.10 | 3.67 | 0.49 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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