Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCSCCCCCCCCCCCCSSSSSSSCCCSSSSSSSSSCCCCCSSSSCCCCCCCCCCCHHHHHHHHCCCCSSSSCCCCCCCCCSSSCCCCCCC MDKLNKITVPASQKLRQLQKMVHDIKNNEGGIMNKIKKLKVKAPPSVPRRDYASESPADEEEQWSDDFDSDYENPDEHSDSEMYVMPAEENADDSYEPPPVEQETRPVHPALPFARGEYIDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLPALTALQKPQVPPKPKGLLEDEADYVVPVEDNDENYIHPTESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSPLPRAGKKPTTPLKTTPVASQQNASSVCEEKPIPAERHRGSSHRQEAVQSPVFPPAQKQIHQKPIPLPRFTEGGNPTVDGPLPSFSSNSTISEQEAGVLCKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVVFFNKRVYNIPVRFIEATKQYALGRKKNGEEYFGSVAEIIRNHQHSPLVLIDSQNNTKDSTRLKYAVKVS |
1 | 1vt4I3 | 0.04 | 0.04 | 1.91 | 1.29 | MapAlign | | KPYICDNDPKYERLVNAILDFLPKAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
2 | 2eo6A | 0.84 | 0.25 | 7.05 | 1.49 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGPFNSTFADQEAELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVS |
3 | 1zvoC | 0.11 | 0.10 | 3.69 | 1.04 | MUSTER | | --RL-QLQESGPGL----------VKPSETLSLT---IVSGGPIRRTGYY-IRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRSAADTYYPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVTGYHPTSVTMGTQSQPQRTFPEIQRRDSYYMLQQWRQGEYK--VVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFT----FVVGSDLKDAHLTVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS---TL------NHPSLPPQRLMALREPAQAPVKLSLNLPEAASWLLVSFSPPNILL----LEDQREVNTS------GFAPARPPPQPGSTTFWAWSVLRPAPPSP |
4 | 2eo6A | 0.84 | 0.25 | 7.05 | 1.64 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGPFNSTFADQEAELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVS |
5 | 2nbiA1 | 0.13 | 0.10 | 3.40 | 1.47 | SPARKS-K | | ASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPGSPPICSPTMLPTNQPTPPEPSAPSDCGEVIEECPLDTCFLPTSDPA----RPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMTPSPDGSPPNCSPTMLPT--PQPSTPTVITSPAPSSQPSQCAEVIEPIDECFLPYGDSSRDCTDPAVNRPDCDVLPTPQNINPACCAFECRPDNPMFTPSPDGSPPICSPMPSPEPSSQPSDCGEVECPIDAFLPKSDSARPPTAVGRPDCNVLPFPNPSCCPFECSPDNPMFTPSPSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR----------------------------------------------------------------------------------------------------------------- |
6 | 1r70B | 0.09 | 0.08 | 2.93 | 1.01 | MUSTER | | VKLL---EQSGAEVKKP-----------ASVKVS---KASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLDPYGGGKSEFDYWGQGTLV-TVSSASPTSPKVFPLSLDSTPQDGNQGFFPQEPLSQNVTARNFPPSQDASGDLYTTSLPATQCPDGSVT--HVKHYTNPSQDVTVPCPVPPPPPCCHPRLSLHRPALEDLLLGSEANTLTGLRDASGATSGKSAVQGPPERDLCGCYSVSSVLPGCAQPWNHGETAHPELKTPLTANITKSGNTFRPEVHLLPPPSEELALNELVTLTLARGFSPKDVLVR---WL-----------------QGSQ----PREKYLTWASRQEPSQGTTTFAVTSILRVAAED-----WKKGDT--FSMV--------GHEA----LPLAFTQKTIDRLAGKPT |
7 | 2nbiA | 0.13 | 0.12 | 4.04 | 1.45 | SPARKS-K | | SRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPA----RPPDCTAVGRPVLPFPGCPACCPFECSPDNPM-----FTPSPDGSPPNCSPTMLPT--PQPSTPTVITSPAPSSQPSQCAEVIEPIDECFLPYGDSSRDCTDPAVNRPDCDVLPTPQNINPACCAFECRPDNPMFTPSPDGSPPICSPMPSPEPSSQPSDCGEVECPIDAFLPKSDSARPPTAVGRPDCNVLPFPNPSCCPFECSPDNPMFTPSPSPPNCSPTMLPSPSPSAVTVSSQPSECADVLE------------------LCPYDTCFLP----FDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPVCSPTMMPSPLPSPTE---------- |
8 | 2cr4A | 0.22 | 0.05 | 1.73 | 1.28 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS------SGSSGEDYEKVPLPNSVFVNTTESCEVERLFKAEPQDGLYCIRNSSTKSG---KVLVVWDENKVRNYRIFEK--DSKFYLE----GEVLFVSVGSMVEHYHTHVLPSHQ-------SLLLRHPYGYT |
9 | 5jcss | 0.09 | 0.09 | 3.29 | 1.37 | SPARKS-K | | GTFEWRAGVLATAVKEGRWVLIEDIDKAPTDVLSILLSLLEKRELTIPSRGESTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHI----LAQKFPILTNLIPKLIDSYKNIYMNTKFISLNKGAHTRVVSFKNNGINKPDQLIQSSSEAADCFAGAIGEFKALEPIISLDIASSRISLFLTQHVPTLENLDDSIKKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLLVKMLAKKLTVINVSQQKPKTVAVPIQENFETLFNATFSLKKNEKFHKNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKW-------ADFNDSVKKFERAGEWLLSISDLLTEPDSRSILLSEKGDAEPIKARFTEIIDKYIGKYSVSDEWVGNDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTLTRT |
10 | 2ysxA | 0.26 | 0.06 | 1.96 | 1.26 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMVPCWNHGNITRSKAEELLSRTGKDGSFLVRASES--ISRAYALCVLYRNCVYTYRILPNEDD-KFTVQAEGVSMRFFTKLDQLIEFYKKENMGLV---------THLQYPVPLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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