Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCHHHHHHHHHCCSSSSHHHHHHHHHHHHHHHHHSSSSSCCSSSSSSCCSSSSSSCCCCCCCHHHHHHCCCHHHSHSSSSSHHHHHHHHHHSSSCCSSSCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCSSCCCCCCCCCCCCCCCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MQPPVPGPLGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIILGFGSFLGIIGINLVENRRQMLVAAIVFISFGVVAAFCCAIVDGVFAAQHIEPRPLTTGRCQFYSSGVGYLYDVYQTEVTCHSLDGKCQLKVRSNTCYCCDLYACGSAEPSPAYYEFIGVSGCQDVLHLYRLLWASAVLNVLGLFLGIITAAVLGAFKDMVPLSQLAYGPAVPPQTLYNPAQQILAYAGFRLTPEPVPTCSSYPLPLQPCSRFPVAPSSALASSEDLQPPSPSSSGSGLPGQAPPCYAPTYFPPGEKPPPYAP |
1 | 6wvgA | 0.06 | 0.06 | 2.61 | 0.41 | CEthreader | | GHKLEYNMGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGIAGTSDWTSGPPASCPSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDKTSNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGITHHHH---------------- |
2 | 5ganJ | 0.08 | 0.07 | 2.82 | 0.67 | EigenThreader | | TQFIPQSMDLLTAYTNLQSISTLLEELLKEGLLELSKNWLKRAEALNDAP-----NSNLTCQAIVYAILEWLRESGE---YESELNNVDQILEKVQIAVLKKLIQWDRLKMATESYEELLAFFQELLFQTSDDEKSP-------------------GLLMMYVSEYWKAQKGDTRQTLVLIDQIIDFLRFFKIKLLGRSLELRDFFQQTFSSLEDFLYYKYVNFLRYQDLNEEAIKFLNERCLKSFPICHKFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDEIDLKNPVRARSILDRGLLKNPDDVLFYIAKI |
3 | 6k4jA | 0.16 | 0.09 | 3.07 | 0.53 | FFAS-3D | | -----------MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETGALMMLVGFLGCCGA--VQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIK-----------------EVQEFYKDTYNKLKTKDEPQRAIHYA-LNCCGLAGGVEQFISDICPKKDVLESCPDAIKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRR-------------------------------------------------------------------------------------------------------- |
4 | 4btgA | 0.14 | 0.13 | 4.58 | 0.87 | SPARKS-K | | QLPLQFTRTFSASMTSELVMYARLFFQYAQAGVDELVNQFTEYHQSTACNPEIKLTAYITGILEQLRHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYFYALVDCVRASDLRRM------LTALSSVDSKMLQATFKAKG-ALAP----ALISQHLANAATTAFERSRGNFDANA-------VVSSVLTILGRLWIDQLRSNLALFIA-YQDMVKQRGRAEVIFSDEELSSTIIPWFIERPINETTSYIGQTSAIDHMGQPSHVVVDWQFAKETPVKLANNSNLDVEPAPIGNTSQRGTVNSNGAEM---TLGFPSVVERDYAL |
5 | 3rkoB | 0.13 | 0.06 | 2.12 | 1.01 | CNFpred | | ---------------------PVSALIHAATMVTAGVYLIARTHGLFLMTPELHLVGIVGAVTLLLAGFAALVQTDIKRVLSTMSQIGYMFLALAWDAAIFHLMTHAFFKALLF--------------------------------------------LASGSVILACHH------EQNIFKMGGLRKSIPLVYLCFLVGGAALSALTAGFFSKDEILAGA--------------------------------------------------------------------------------------------------------- |
6 | 5xjcA | 0.06 | 0.04 | 1.79 | 0.67 | DEthreader | | IRGDMNLIHRLNYLPLKERKKSRFG----------DKTVCKKNLGLTIEFM-DLYSH----------------------------------------------------------VYKWCQG--INN------DVWETGECNVMLVLGRHPFEAMHDVNLGRAVFWDIKNRLPRSTTVQWENSFVSVLLFNMCGDDESMQRFHNRVRICNKIQTRIKIGLNRTLSPNQLDLTGIWQIHESIVMDLCQVFD---KETIHPRKSYLIINPAL--IIWFVIFIFLKITIVTRKGMLDLEVIKGSELQLPF----L--------Y-FILG |
7 | 5x5yF | 0.08 | 0.05 | 2.09 | 0.74 | MapAlign | | ----------IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMARIPGFLQLILPLGLFLGALLVAILVAWLSLFLAPQGINQFALLLNKQDTLTEFQAMRDGTRVTYTEELSKDRGELAGIFISQKDERGISILAEKGLILHNGYRYDGNPGQANYRAIQYDTYGVLPAILLYMGYLALLIAVRGQGLWWVHGLFLAIGLLLFYWEPLRLKLA---------------------------------------------------------------------------------------------- |
8 | 2pedA | 0.13 | 0.11 | 3.75 | 0.47 | MUSTER | | KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLTPLNYI--LFMVFGGFTTTLYTSLHGYFVTGCNLEGFFATLGGEIALWSLVVLAIERYVVV--KPMSNFRFGENHAIMGVAF-VMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETN---------------NESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFF-CCGKNPLGDDEASTTVSKTETSQVAPA---------------------------- |
9 | 2pffB | 0.16 | 0.15 | 4.89 | 0.67 | HHsearch | | SQLQEQFNKILPEPTEGFAADDE---PTTPAELVGKFLGYV-----SSLVEPSKVGQFDQVLNLCLTEFHALAAKLLQENDTTL--------------VKTKELIKNYITARIMAKRPFDKKSNLFRAVGEGNAQLVAIFGGQGNTDDYFEELRDRTTLVFTNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELKAIGVRCYEAYPNLPPLENNEGVPSPMLNLTQEQVQDYVNKTN--SHLPAGKQVEISLVN----GAKNQSRIPFSERKLPVASPFHSHLLVPADLVKNNVSFNAKDIQIPVYDT |
10 | 6mjpG | 0.07 | 0.07 | 2.99 | 0.36 | CEthreader | | WYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAFATSGGAIVRTGVWARDANDFIFIKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIALSFIFGPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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