Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCSSSCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCSSSHHHHHCCCCCCCCCCCSHHHHHHHHHHHHHCCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHCCCCCCSSSSHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCSSSSSCCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSKSPKRQLEPTLKPL |
1 | 5fd7A | 0.23 | 0.06 | 1.87 | 1.14 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTKAIVRLREHINLLSKKQSHLRTQITNQENEARIFLTKGNKVMAKNALKKKKTIEQLLSKVEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKVDETMDEIREQVE------------------------------------------------------------------------------------------------- |
2 | 1i19A | 0.08 | 0.07 | 2.72 | 1.16 | MapAlign | | ----------VAPLPTPPNFPNDI---ALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYATVAGAAIVTELQKHDLGWANLPLSIGGALATLPGLVTEL-TAVVWNGTTYALETYQRNDPRITPLLTNLGRCFL-TSVTMQAGPN---------------FRQRCQSYTD--IPWRELFAPKGADGR--TFEKFVAESGAEAIWYTEKPWMKVWTV-----SPSLVGKPPQAREVSGP-YN--YI--FSDNLPEPITDMIGAINAGNPGIAPLFGPAMYEITKLGLATANDISKDVQFYNIATVINDFTEWFHERIEFYRPDHPDWDVAIWLNVLGVPGTPGMFEFYREMEQWMRSHYNNDDATF----RPEWSKGW-AFGPDPYTDNDIVTNKMRATYIEGVPTTENWDTARARYNQIDPHRVFTNGFMDKLL--------- |
3 | 5vo5A | 0.19 | 0.08 | 2.42 | 3.02 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------NMLEALQQRLEKYQSVEA--------------AAKAENN-----SG---KARRFGRIVKQYEDLYKAGKPVPYDELPVPPGFGGTTGE-AIQKLRETENMLIKKQEFLEAKIEDELNIARKNAS-KNKEVALQALKKKKELEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDD------------------------------------------------------------------------------------------------------- |
4 | 6gmhQ | 0.07 | 0.07 | 2.78 | 0.67 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARL |
5 | 6wc3A | 0.07 | 0.06 | 2.66 | 1.00 | EigenThreader | | RDLEHELLERRCDTELFVSTDDSVHELREKAGLLFQLSQLLLPEPRADQLWNFVCMANNFRIKFIYHF-----TLYKYMDIFEDESKGITRTLIHKQFINHILEPVREKVNVTMTKIAVKMLVLLISEIFITDNALKKSHYYDGV---GLVSLVWQNFEVESAVSQFEKLLMSPKNGADFGKLLENMYRYLEPFFSIKYQLVDEIFIQLPLK--------YRSFLLSKNILQNELT-------AEQQFENTCVKLHSLLLISNILVRFSTFIEMTQQINKITEVWESYDEAVIVLRDSIVHRWVKGLSSSLNYFKYLVGALAWMKKMTDIFDK---YWYPQHIIAQIKVALLENIIKFMLNYV------VKLNKFSENGLRQLTFDYEALRATLGLPLEHSSVMKYTNNKITSKFLDAEYVSSHHTRNFRELRESLQVSHLTSDEIADALYRT |
6 | 6zh3B | 0.08 | 0.03 | 1.05 | 1.11 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQINKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIELEKELMKSGIISEMVDDTMESVGDVGDEAVDEEVNKI------------------------------------------------------------------ |
7 | 5h7cA | 0.13 | 0.10 | 3.39 | 0.71 | SPARKS-K | | -----KFNKEQQNAFYEILHLPNLN--EEQRNAFIQSLKDDPSQSANLAEAKSLNVNQAVKQLAEKAKEVIEIVKELAELAKQSTLVNEIVKQLAEVAKEATD-----------------KELVIYIVKILAELAKQSTDS------------ELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQ-STDSELVNEIVKQLEEVAE-------------------ATDKELVEQQSAFYEILSQRNAFIQSLKDDPSQSANLLAEAKSLNVNQDKEEVIEIVKELAELAKQSTD-SELVNEIVKQLAEVAKEADKELVIYIVKILAELAKQST---DSELVNEIVKQLAEVAKEVKILAELAKQS---TDSELVNEIVKQLEEVAKEA-------------------------TDKELVEHIEKILEELKKQS----------------- |
8 | 1u4qA | 0.08 | 0.06 | 2.16 | 0.82 | CNFpred | | ---------------------------------------------QQNFNTGIKDFDFWLSEVEALLASEDYGLASVNNLLK-------KHQLLEADISAH-----------------------EDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRA---KLNESHRLHQFFR-------DMDDEESWIKEKK------------------LLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI-GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEY---QQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHK-----DRVNDVCANGEDLIKKNNHHVENIT----------------AKMKGLKGKVSDLEKA---------------------- |
9 | 6xjbA | 0.11 | 0.06 | 2.25 | 0.67 | DEthreader | | GVLAGERNYETTDA-----------------------RDSIVKEVLPELQKLDYSAIRKTLGISVKLTELYL-------------IKNNKEALLLGLTY----LERWYN--FN--Y-----G--VNVKDLVMYHPDFFGTSPLDTLELNLLAK--------------------------V---I--------KYRNMVLPLLT-LPERSVFVISTMSSLGFGAYRYRSHLVNATAKRQRHAYTHEMTHDSDQDIYL-G--------------------------------Y--GRRNGLGPEFFAKGLLQAPDQPLKHDTEGRQVLDPTERFQ--N--AA--DLQNYVHNMFDITIKLFAP-----RWSNYDPEIDSAVHKLKRAIFKAYLDQDFRSSI------------------------------------------------------ |
10 | 6gmhQ | 0.05 | 0.04 | 2.04 | 1.16 | MapAlign | | ---------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQMYENCLNVALVLQRLATSVLKDKEVLNAVKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLK---------------EQEEKRLREKEEQKKLLEQRAQYVEKTKNILM----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|