Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCSSSSSSCCSSSSCCCCCCSSSSSSSSSSCCCSSSSSSSHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC NRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMPFFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL |
1 | 2rakA2 | 0.16 | 0.12 | 4.18 | 1.17 | DEthreader | | YPSTFDCVVADPRKGSKGLKSYIEYQLTPTN--TNRSVNHRYKHFDWLYERLLVKFGAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRH--P-V-ISE----SEVFQQFLNF--RD-------EKE--TG----------MEPEAYQAEMNHFH |
2 | 2v14A | 0.33 | 0.26 | 7.88 | 2.15 | SPARKS-K | | LKDPIKISIPRYVLCGQGKDAHFEFEVKITVLDETWTVFRRYSRFRE-HKTLKLKYAELAALEFPPKKLFGNKDERVIAERRSHLEKYLRDFFSVLSATSPLHINKVSKHTICEFSPFFKKGVFDYS--------------------------------- |
3 | 2mxcA | 0.18 | 0.14 | 4.46 | 1.03 | MapAlign | | PSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLKESTVRRRYSDFEWLRSELERES-KVVVPPLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHLAQ---------NERCLHMFLQDEIIDKSYTPSKI------------------------------ |
4 | 6h7wB1 | 0.24 | 0.19 | 5.84 | 0.87 | CEthreader | | ARPTFHITVGDPHKVGDLATSHIVYSVRTKTTSPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAH-----PTLQLD------ADLKLFLESESFNIDVKHKERKE------------------------- |
5 | 1xteA | 0.29 | 0.21 | 6.29 | 1.93 | MUSTER | | KESCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNSLKKQFPAM-ALKIPAKRIFGNFDPDFIKQRRAGLNEFIQNLVRY-----PELYNHPDVRAFLQ-----MDSPRHQ---------------------------------- |
6 | 6h7wB | 0.24 | 0.21 | 6.42 | 2.10 | HHsearch | | ARPTFHITVGDPHKVGDLATSHIVYSVRTKTTQPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAH-----PTLQLDAD------LKLFLESES-FNIDVKHERKE----NK--------FVEQDDWFHDR |
7 | 4oxwA | 0.28 | 0.18 | 5.55 | 1.86 | FFAS-3D | | ----MKVSIPDFEKEGEGKSKHVMYKIKVKTGGEEWAVYRRYSDFYWLHKKLQQRYPELVPELPPKKWIYSALDEQILEKRKQGLEKYIQRIVSH-----PVLANDELVVSFLQ---------------------------------------------- |
8 | 6h7wB | 0.20 | 0.19 | 6.20 | 1.03 | EigenThreader | | ARPTFHITVGDPHKVGDLATSHIVYSVRTKTTSPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHPT-----LQLDADLKLFLENIDVKHKERKENKLKAMDNMVAQRKAMLHALSTVELSPTLSGPLDA |
9 | 2v14A | 0.33 | 0.26 | 7.88 | 1.36 | CNFpred | | LKDPIKISIPRYVLCGQGKDAHFEFEVKITVLDETWTVFRRYSRFREMHKTLKLKYAELAALEFPPKKLFGNKDERVIAERRSHLEKYLRDFFSVMLQSASPLHLTLSKHTICEFSPFFKKGVFDYS--------------------------------- |
10 | 2rakA | 0.16 | 0.12 | 4.18 | 1.17 | DEthreader | | YPSTFDCVVADPRKGSKGLKSYIEYQLTPTN--TNRSVNHRYKHFDWLYERLLVKFGAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRH--P-V-ISE----SEVFQQFLNF--RD-------EKE--TG----------MEPEAYQAEMNHFH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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