Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPPTGSCLRHSAQPTASQARSTISTAAHSAAQAQDRPTATVSPLRTQNSPSRLPATSLRPHSVVSPQHSHQPPVQMCPRPAIPLTSAASAITPPNVSAANLNGEAGGGPIGVLSTSSPTNTGCKLDEKKSEKKEKKSGLLKLLAGASTKKKSRSPPSVSPTHDPQVAVDALLQGAVGPEVSSLSIHGRAGSCPIESEMQGAMGMEPLHRKAGSLDLNFTSPSRQAPLSMAAIRPEPKLLPR |
1 | 4hzvA | 0.09 | 0.09 | 3.34 | 0.51 | CEthreader | | PFHKDNAIRLGENKDVIVTREPYVSCDNDNC----WSFALAQGALLGTKHSNGTIKDRTPYRSLIRFPIGTAPVLGNYKEICIAWSSSSCFDGKEWMHVCMTGSAQIIYGGRMTDSIKSWRKDILRTQESECQCIDGTCVVAVTDGPAANSADYRVKYENVPKTKIQHLEECSCYVDIDVYCICRDNWKGSNRPWMRINNETILETGYVCSKFHSDTPRPADPSTMSCDSPSNVNGGPGVK |
2 | 5v7vA | 0.03 | 0.03 | 1.86 | 0.53 | EigenThreader | | EILTTSLEISRRAQGPIGRACIDLGLINQYITNNISQAISYYMKAMKTQANNGIVEFQLSKLATSFPE--------EKIGDPFNLMETAYLNGFISVENTAYLFKTFVDKNEAIMAPKLRTAFAALINVALWAYSQLATAQVSAAYLMYQLPYEFEDPPRTTDQRKTLAISYYTRAFKQGNIDAGVVAGAMALYQGAALKYSIQAIWNLGYMHEHGLGVNRDFHLAKRYYDQVSEHDHRFY |
3 | 6em3K | 0.09 | 0.08 | 3.02 | 0.46 | FFAS-3D | | -------------IPRERVIKAVNELIKFTSKPEEELKKDLQLIVTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKVSEDDLFDQLDSEGI---------KVDEIICGKDLKTVYKAYEARNAFISQLMGGKAYNKVETTPTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGN--LEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPL-- |
4 | 5fvmC | 0.10 | 0.10 | 3.55 | 1.19 | SPARKS-K | | TSD-KKYLAAAGHLHVRLYDI--RSNNPNPVSSFEGHKGNVTSIAFQQENRWMVSSSEDGTIKVW-DVRSPSVQRNYKHNAPVN-EVAIHPNQGELISCDQDGNDLGENQCTNQLTPEDNTPLQSLSVASDGSMLNKGNCYVWRM-PHHTDASTLEPVTKFKSHTKYITRVLLSADVKNLATCSADHTARVWNIEDNYQLETTLDGHQRWVWDCDSAYVTACSDHYVRLWDLSTSEIVRQY |
5 | 2uv9D | 0.12 | 0.09 | 3.07 | 0.67 | DEthreader | | AIEPAFSFSRQVTEYYQGIYAR-CG-------ARGSQL-VVVPFN----------------ALVNYIY----D---TKNGLGWDLVPLLAIKAQVILPLSKALTLWTICGAVI-GWTRG-TGLMS----------FSLEGCVEMAWIKNGWR-G-----GITDPYEFYLEVGNCATGPGKARVC------------QLALEMGVRQAYRFFHGLINKFVAKDKAPYQSVFLNPQS------ |
6 | 4iglB | 0.07 | 0.07 | 2.76 | 0.74 | MapAlign | | QSVDAGNTLVLNDTEGRSVIAMTNISRENGKDDFQYENAPLPGRPLSVTEQVNGENARITEHFVYAGNTPQEKNLNLAGQCVSY---YDAAGLIQTDSVSLTGKPLSVSRKLLKNLDDTNIWQGNDTSAWNSLLATEIYTTVTRTDAAGAVLTTIDAVGNQQRIAGQLSASWLTLKGGQEQVIIKVLTYSAAGQKLREEGGNGVVTTYTYEAETQRLIGIKTERPNGHAAGAKVL------ |
7 | 4k0mC | 0.09 | 0.07 | 2.80 | 0.85 | MUSTER | | --------------------------KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVR----GTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAA--------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------- |
8 | 3htxD3 | 0.16 | 0.12 | 4.01 | 0.60 | HHsearch | | --TVNSFYRICCGMSPNISRQAVIAA--------QLPFAFTTKSNWRGPL---P----RELGLFCHQHRLAEPILSSSRCLKALLWFSKDLSPNVFPPSSESKEKRV----QSITNGSVVSICYSLSLAVDPEESSVEPIE---SN-------------EEIEFEVG-----TGSMNPHIESETVGEYASFKTPPDALILAVGSDTLS-ERPCLNYNIL---------LLGV-KGP--S-- |
9 | 3ttoA1 | 0.05 | 0.05 | 2.20 | 0.48 | CEthreader | | --------AKGLRQDSNGKLRYFDLTTGIQAKGQFVTIGQETYYFSKDHGDAQLLPMVTEGHYGTITLKQGQDTKTAWVYRDQNNTILKGLQNINGTLQFFDPYTGEQLKGGVAKYDDKLFYFESGKGNLVSTVAGDYQDGHYISQDGQTRYADKQNQLVKGLVTVNGALQYFDNATGNQI-KNQQVIVDGKTYYFDDKGNGEYLFTNTLDMSTNAFSTKNVAFNHDSSSFDHTVDGFLTA |
10 | 5cqrA | 0.09 | 0.09 | 3.34 | 0.52 | EigenThreader | | HRALVLAQIRKWLDKLMFKEAFECMRKLR--INLNLIYDHNELKEEDVTKTMYPAPPDGNKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPEKVHELQGNAPLVDVNELYDHSLGTYDFDLVLMVAEKNYQRFTIDKYLAIGHLSKCGPLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHID |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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