Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCHHHHHHCCCCCCCCCCSCCCCCCSCCCCCSSSCCSSHHHHHHHHHHCCCCCCCCCCCCCCCSSSSCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCSSSSSSCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLDGLKMEENFQSAIDTSASFSSLLGRAVSPKSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGSAGMEGIMNPYTALPTPQQLLAIEQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGPLQSRVGNPIDHLYSMQNSYFTS |
1 | 4adyA | 0.11 | 0.07 | 2.47 | 0.67 | DEthreader | | ----DSVKTYALPDIEALYDD----------ASYY--GEYESAVKYALAAKD-FDISQFVET-----IVS--SIEYVQEIFIKCLELKLALGLTSENVKIIN----SSILRKSFDFLNCDYFKLKEEN------IALVSSALLLELTQYDLLNILSGLLLFGRDTTDYLNIENSVLYNDSATSAALGGLLVLAIKLASD------------------------------------------V-VSDSNVRRAAVILVTFALGIACAGKGLQLQTEKLKEDAFKYIQSRYISFIKDDRFVPV------------------------------------D--EPKEP--V--AL---------------IE--TVRQK--D--- |
2 | 2xjyA | 0.33 | 0.11 | 3.23 | 0.77 | CEthreader | | ------------------------------SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGERLYYKLGRKLCRRDYLRLFDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTKING---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2j04A | 0.05 | 0.04 | 2.19 | 1.34 | MapAlign | | NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKMLTNLTYHCFEWNPSSIVVGNEDGLLSSKDWV-THIVWYEDVLVAA-LS--NNSVFSMTVSRMIQKITDLKIVDYKVVLTCPGYVHKSSLKTLENFHIIPLESTILLMELIAPYLEKKFKKWSTIWNETTLVIHGISLSPDGYSIAIVYDMERVAFKYKIASEQSFNIMFAPLYHTWTISERAVGLAWYQTYQIYQSLPKLYLNALMKSEEMRIIMFLNMPSILSFLEALYEYAINKKSELTNSFDLACVLSIAAILKREAPIYNGTLLMKNSFLEETFNLESFTADPETVTSTTNNTWKRCGVTLLP--ILTTHVKICPVSKQRVIDIKRDDLNDYGWFTRGLL |
4 | 2jtnA | 0.39 | 0.16 | 4.64 | 0.78 | EigenThreader | | DERLITQFDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 2jtnA | 0.41 | 0.16 | 4.63 | 1.33 | FFAS-3D | | -----TQFDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 3mmkA | 0.37 | 0.15 | 4.35 | 2.18 | SPARKS-K | | ------------------------------QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRFGTKCTACQQGITQV--VRKAQDFVYHLHCFACIICNRQLATGDEFYLMDGRLVCKEDYETAKGGGTPLVAGSPIGHENAVQGSAVEVQTYQP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 2dfyC | 0.42 | 0.13 | 3.77 | 2.58 | CNFpred | | -------------------------------WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGTSSYTKSGMILCRNDYIRLF-GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2jtnA | 0.41 | 0.16 | 4.78 | 1.01 | MUSTER | | MGGEFGDEDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2jtnA | 0.39 | 0.16 | 4.64 | 1.78 | HHsearch | | MGGEFGDEDRLITRLENTQFNGHMGSGGTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2dfyX | 0.32 | 0.13 | 3.86 | 0.77 | CEthreader | | ------------------------------SWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGTSSYTKSGMILCRNDYIRLFSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTALIGGDVMVVGEPTLMGGEFGDEDERLITRLEN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|