Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCHHHHHHHHCCCSSSCCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCSCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCSCCCCCHHHCCCCCCCSSSCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHHCCCCCSSSSCCCCCCCCCCCHHHHHHHCCC FLSEVSENKLKQLNLNNEWTPDKLRQKLQTNAHNRLELPLIMLSGLPDTVFEITELQSLKLEIIKNVMIPATIAQLDNLQELSLHQCSVKIHSAALSFLKENLKVLSVKFDDMRELPPWMYGLRNLEELYLVGSLSHDISRNVTLESLRDLKSLKILSIKSNVSKIPQAVVDVSSHLQKMCIHNDGTKLVMLNNLKKMTNLTELELVHCDLERIPHAVFSLLSLQELDLKENNLKSIEEIVSFQHLRKLTVLKLWHNSITYIPEHIKKLTSLERLSFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESLPDELYFCKKLKTLKIGKNSLSVLSPKIGNLLFLSYLDVKGNHFEILPPELGDCRALKRAGLVVEDALFETLPSDVREQMKTE |
1 | 4u09A | 0.24 | 0.22 | 6.95 | 1.50 | DEthreader | | -------IQKPYK-N---LA--KALQNPA-DV--RNLDLSFQLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQL-QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNN-K--LTV-LP-KEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHN-EFTTVSKEV-LLETLENLDLRSNKLKTIPKEIRQLKSLKVL-LTGNQL-TSLP-KEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNL-QRLELDSNPISPKEKERIRKLLPKC |
2 | 6g9lA | 0.58 | 0.58 | 16.62 | 3.26 | SPARKS-K | | FLSEVSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWRA |
3 | 5hyxB | 0.24 | 0.23 | 7.16 | 0.74 | MapAlign | | ------GVKCNRRGEVSEIQLKEKQLQGSLLKSLTSLTLSSLTGVIPKEIGDFTELELLDLSDNSLSDIPVEIFRLKKLKTLSLNTNNLEGPM-EIGNL-SGLVELMLFDNKLSEIPRSIGELKNLQVLRAGGNKNLRGE--LPW-EIGNCENLVMLGLAETLSKLPASIGNL-KRVQTIAIYTSLLSGPIPDEIGYCTELQNLYLYQNSISSIPTTIGGLKKLQSLLLWQNNLVGKI-PTELGNCPELWLIDFSENLLTGIPRSFGKLENLQELQLSVNQISGIPEELTNCTKLTHLEIDNNLITGIPSLMSNLRSLTMFFAWQNKLTGIPQSLSQCRELQAIDLSYNSLSGIPKEIFGLRNLTKLLLLSNDLSGIPPDIGNCTNLY--RLRLNGNRLAGIPSEIGN----- |
4 | 4u08A | 0.26 | 0.24 | 7.47 | 0.43 | CEthreader | | ------------------QTYYRNITEALKNPQNVRILNLSGLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLALPEEIGQL--QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL-----PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTL--PKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLH-NNPLPSEKIARIRKLLPQC |
5 | 6g9lA | 0.58 | 0.58 | 16.62 | 2.35 | MUSTER | | FLSEVSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWRA |
6 | 6g9lA | 0.58 | 0.58 | 16.62 | 1.31 | HHsearch | | FLSEVSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWRA |
7 | 6g9lA | 0.58 | 0.58 | 16.55 | 2.80 | FFAS-3D | | -LSEVSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWR- |
8 | 6g9lA | 0.48 | 0.46 | 13.53 | 1.15 | EigenThreader | | KKYSFESIREESSYSDIPDVKLRQLNLNNEWQDKLELHLFM-LSGIPDTVFDLVELEVLKLIPD-----VPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHITDIKE--IPLWIYSLKTLEELHLNLSAENNRYIVIDGLREL--KRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWRA |
9 | 6fnwA | 0.57 | 0.57 | 16.29 | 13.90 | CNFpred | | ----SSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFSTLPPEVKERLWRA |
10 | 4z63A | 0.17 | 0.17 | 5.55 | 1.50 | DEthreader | | DSIPTLDLSDSSNKFNGSLPSHICHN-ST--QIRVVKLANFAGNFTSGFGKCVLLEHLCLGMDLTGNIPEDLFHLKRLNLLGIQNRLSGSLSR-EIRNLSS-LVRLDVSNLFSGEIPDVFDELPQLKFFLGQTNGFI-GG--IPKSLAN-SPSLNLLNLRNSLSGRLMLNCTAMIALNSLDLGTNRFNGRLPENLPDCKRLKNVNLARNTFHQVPESFKNFESLSYFSLSNSSLANISSLGILQHCKNLTTLVLTLNHEALPDDSSLHFEKLKVLVVANCRLTSMPRWLSSSNELQLLDLSWNRLTAIPSWIGDFKALFYLDLSNNSFTEIPKSLTKLESLPTIELGHNNLSGIWEEFGNLKKLHVFDLKWNALSGIPSSLSGMTSL--EALDLSNNRLSGSIPVSLQQLPGQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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