>Q8TDL5 (150 residues) EEFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQ LIVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQP DVLKNIITEIIHSILLPNQNGKLRSGVPVS |
Sequence |
20 40 60 80 100 120 140 | | | | | | | EEFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQLIVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNIITEIIHSILLPNQNGKLRSGVPVS |
Prediction | CCSSSSSCCCCCCCHHHHHCCCHHHCHHHHHHCCCCCSSSSSCCCCCSSSSCCCCSSSSSSSSSSSSSCCCCCCCSSSSSSSSSSSSSSSSSCCSSSSSSCCCCCSSSSSSCCCCCCSCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC |
Confidence | 954886255585412554164012078999865998259998079986998389669986899999834898561799978877899999948889987046763189972378752166999999999988720202567861498899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | EEFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQLIVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNIITEIIHSILLPNQNGKLRSGVPVS |
Prediction | 841100243123622541434244134610761444231403165213020456414133304031214374332001031424340303145430113245254340404437235041530440043104312123125305743438 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCSSSSSCCCCCCCHHHHHCCCHHHCHHHHHHCCCCCSSSSSCCCCCSSSSCCCCSSSSSSSSSSSSSCCCCCCCSSSSSSSSSSSSSSSSSCCSSSSSSCCCCCSSSSSSCCCCCCSCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC EEFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQLIVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNIITEIIHSILLPNQNGKLRSGVPVS | |||||||||||||||||||
1 | 4m4dA | 0.14 | 0.14 | 4.77 | 1.33 | DEthreader | AYLNFSITDDMLPHSGIRLNAFRPFTPQIYKYPDMKLELLGTVVS-APILNSPGNLSLAPQMEIEGFVILTAREPVFRLGVVTNVFASLTFNNSKVTGMLHPDKA-QVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQGFPLP | |||||||||||||
2 | 1bp1A2 | 0.20 | 0.19 | 6.17 | 1.91 | SPARKS-K | --MTLR-DDMIPKESKLTTKFFGTFLPEVAKKFPNMKQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVNSALASLFLIGMHTTGSMEVSAESNRLVGELKLL---LLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPL- | |||||||||||||
3 | 4m4dA | 0.18 | 0.18 | 5.85 | 1.34 | MapAlign | YLNFSITDDMLPHDSGILNTKFRPFTPQIYKKYPMKLELLGTVVSAPILNVSPGNLSLAPQMEIEGFVILSAREPVFRLGVVTNVFASLTFNNSKVTGMLHPDKA-QVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQGFPL- | |||||||||||||
4 | 4m4dA | 0.19 | 0.19 | 6.03 | 1.33 | CEthreader | LNFSITDDMLPHDSGIRLNTKFRPFTPQIYKKYPDMLELLGTVVSAPILNVSPGNLSLAPQMEIEGFVILSAREPVFRLGVVTNVFASLTFNNSKVTGMLHPDKA-QVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQGFPLP | |||||||||||||
5 | 1bp1A2 | 0.21 | 0.21 | 6.55 | 1.89 | MUSTER | ---MTLRDDMIPKESKLTTKFFGTFLPEVAKKFPNMKQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVNSALASLFLIGMHTTGSMEVSAESNRLVGELKL-DRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPL- | |||||||||||||
6 | 4m4dA2 | 0.17 | 0.17 | 5.47 | 4.13 | HHsearch | -YLNFSITDMLPHDSRLNTKAFRPFTPQIYKKYPDMKLLLGTVVSAPILNVSPGNLSLAPQMEIEGFVPTSAREPVFRLGVVTNVFASLTFNNSKVTGMLDKA---QVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQGFPL- | |||||||||||||
7 | 1bp1A2 | 0.21 | 0.20 | 6.37 | 1.83 | FFAS-3D | --MTL-RDDMIPKESKLTTKFFGTFLPEVAKKFPNMKIIHVSASTPPHLSVQPTGLTFYPAVDVQAFLPNSALASLFLIGMHTTGSMEVSAESNRLVGELK-LDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPL- | |||||||||||||
8 | 4m4dA2 | 0.17 | 0.16 | 5.25 | 1.18 | EigenThreader | LNFSITDDMLPHDSGIRLNTKAF-----RYKKYPDMKLELLGTVVSAPILNVSPGNLSAMEIEGFVILPTSAREPVFRLGVVTVFASLTFNNS--KVTGMLHPDKAQVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQG---F | |||||||||||||
9 | 1ewfA | 0.20 | 0.19 | 6.21 | 1.99 | CNFpred | LKMTLRDD-MIPKESRLTTKFFGTFLPEVAKKFPNKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLSALASLFLIGMHTTGSMEVSAESNRLVGELKLD-RLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLP | |||||||||||||
10 | 4m4dA2 | 0.17 | 0.17 | 5.48 | 1.33 | DEthreader | YLNFSITDDMLPHDSGIRLKAFRPFTPQIYKYPDMK-LELLGTVVSAPILNSPGNLSLAPQMEIEGFVILTAREPVFRLGVVTNVFASLTFNNSKVTGMLHPDKA-QVRLIESKVGMFNVNLFQAFLNYYLLNSLYPDVNAELAQGFP-L | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |