Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCSHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCSSSCCCCCCCCCCSSSSSSSCSSSCCCCCHHHHHHCCCCSSCCCCCCCCCSSSSSSHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCSSSCHHHHCCCCCCCCC MAGPWTFTLLCGLLAATLIQATLSPTAVLILGPKVIKEKLTQELKDHVPISLSIDRLEFDLLYPAIKGDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPLVKALGFEAAESSLTKDALVLTPASLWKPSSPVSQ |
1 | 3f9sA | 0.13 | 0.09 | 3.24 | 0.62 | CEthreader | | VWSEGNIEASDKYIAYTVLHDPGDPWEGRELDVAGYKERVKTLRAA-------FPDQCFDIQGLFADGDAVVTWLWTATHKEDISTGKQIKSGATVYYFDGNRLTGHWQITDRLGVYQQLRQAA------------------------------------- |
2 | 6pt7A | 0.08 | 0.07 | 2.72 | 0.62 | EigenThreader | | VAGERGAADRKFPDLNKAVKRDPKTNKRS---ATNNWDFWTLLHQVTIVMSYRHMHGFGSHTFSFINANNEFWVKFHMRTQGDFPKWKMYVQIMPELDAEKVPYHPFSFSPDRMLQARL--------FNYADAARYRVGVNHYQ---------IPVNAPRC |
3 | 6d6vA3 | 0.15 | 0.12 | 3.95 | 0.45 | FFAS-3D | | -----SYKQITNFLRQII--QNCVPN--QLLGKKVFLEKLYEFVQMKRFENQK--------VLDYICF-------------MDVFDVEWFVDLKNQKFTQKRKYISDKRKILGDLIVFIINKIVIPVLRYN-FYITEKHKEGSQIFYYRKPIWK------- |
4 | 5uvdA | 0.08 | 0.07 | 2.99 | 0.58 | SPARKS-K | | PLSSDELKTVVSVLAQKLDSL--NIDYAIMITADNLTTQLLKSFPSDFEGVSQFGHTIPAYKLRRPGGTVQLVELEVFDYQSWPQ-RPQYDLQTATRTTLNINGQKVKLFSPEWILREKILSQYQTDIRDIISMIPLAVPGKPELNFNQSQELQTALANLV |
5 | 1bp1A | 0.13 | 0.10 | 3.43 | 0.79 | CNFpred | | SKVGWLIQLFHKKIESALRNKM--NSQVCEKVTNSVSSKLQPYFQTLVMTKIDVAGINYGLVPPATTAETLDVQMKGEFYSENHHNPPPFA--PPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQE------------------------------------ |
6 | 4kx7A | 0.08 | 0.07 | 2.70 | 0.83 | DEthreader | | ---LPVQEDDSKG-SILRMLWILLPVKVMDTWTRQMG--Y--PV--L-NVNGV--KNITQKRFPSQPSDLYTWNIPVKWTE-DNITS-SVL---FNR--S---EKEGI-LINPDIGDASLIDDAFALARYKLNTKYLKREENFLPWQRVISTYIISMNNIE |
7 | 2pffB | 0.07 | 0.07 | 2.83 | 0.95 | MapAlign | | ISCPLIGVIQLAHYVVTAKLLGFTPGELGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRI-- |
8 | 1bp1A | 0.15 | 0.14 | 4.80 | 0.47 | MUSTER | | KVG-WLIQLFHKKIESALRNK---NSQVCEKVTNSVSSKLQPYFQTPVMTKIDSVGINYGLVAPATTAETLDVQMKGEFYSENHHNPPPFA--PPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEA---VLKMTLRDDMIPKESFRLTTKFFGTPNMKIST |
9 | 1bp1A | 0.12 | 0.11 | 3.95 | 0.91 | HHsearch | | ISKGWLIQLFHKKIESALRNKM------NSQVCEKVTNSVSSKLQQTLPVMTKVAGINYGLVAPATTAETLDVQMKGEFYSENHHNPPPFAPP--VMEFPAAHDRMVYLGLSDYFFNTAGLVYQEALKMTLDDMIPKESFPNMKIQIH---VSASTPPHLS |
10 | 6w3dA | 0.07 | 0.04 | 1.84 | 0.54 | CEthreader | | RKIIKTLLDIMREGDEDKLRDQMDPNVRADVDKTVHGREHAAKFLAH--IVKRADHISITLKSLHNHNGRLRMQAEVRIVHNGRTERVTL-----EMVFRDHNGKLLIERMKYG----------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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