Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCSCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCSSSSSSCCCCCSCHHHCCCCCCCCCCSSSCCCCCCSSCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHCHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRGTISQEDFERLSGNFPFACHGLHPPPRQGRGSFSREELTGYLLRASAICSKLGLAFLHTFHEVTFRKPTFCDSCSGFLWGVTKQGYRCRECGLCCHKHCRDQVKVECKKRPGAKGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTVPCPVMDPPSTASSKLDS |
1 | 4l9mA | 0.57 | 0.35 | 10.11 | 2.03 | SPARKS-K | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPF---SFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
2 | 5ue8A1 | 0.22 | 0.14 | 4.41 | 0.63 | EigenThreader | | -----------------NNEELKNHVYKKTLQALIY----------------------------PIS------------------CTTPHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCLQRAAEKSSKHGAEDRTQNIIMVLKDRMKIRERNKPEIFELIQEVF--------------AVTKSAHTQQMKAVKQSVLDG-- |
3 | 4l9mA | 0.56 | 0.33 | 9.59 | 1.05 | MapAlign | | ------PDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPFSFCVMDK---DREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
4 | 5do7B | 0.06 | 0.05 | 1.93 | 0.67 | DEthreader | | QHNQLLPNDFDTLLIHGAEACLMSMTIGFLYLLMIGALIPFNVILDVISKCYSERAMLYETYFAKILGELPEHCAYIIIYGMPTYFHFLLVLVCML----A-GNLSSLWTVPA-WISKV-------SFLRWCFEGLMKIQFSRRTYK-D--PLYAYLIGGMVLYSLIKQKPSQDW----------------------------------------------- |
5 | 4l9mA | 0.57 | 0.35 | 10.11 | 0.92 | CEthreader | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPF---SFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
6 | 4l9mA | 0.57 | 0.35 | 10.11 | 1.27 | MUSTER | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPF---SFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
7 | 4l9mA | 0.57 | 0.35 | 10.11 | 3.46 | HHsearch | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPF---SFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
8 | 4l9mA | 0.57 | 0.35 | 10.11 | 1.41 | FFAS-3D | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPF---SFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
9 | 4l9mA | 0.57 | 0.35 | 10.11 | 2.03 | CNFpred | | SGVSPKPDPKTISKHVQRMVDSVFKNYDHDQDGYISQEEFEKIAASFPFSF---CVMDKDREGLISRDEITAYFMRASSIYSKLGLGFPHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKK--------------------------------------------------------------------------------- |
10 | 7jr7B | 0.08 | 0.05 | 2.14 | 0.67 | DEthreader | | QHNQLLPRQSNDFRDTLLIHGAEACLMSMTIMILIPF-NVILDVISKCYSERA-MLYELETTGPYFFAKILGELPEHCAYIIIYGHFLLVLVCCML----LAGGFINSLWVPAWISVSFL-----RW----C-FEGLMKIQFSRR------PLYALIGGGMVLVSFIKQK-PS------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|