Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
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| SS Seq | CCCHHHHHHHHHCHCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCCCSCCCCCCCHHHHCCCCCCCCCCCCCCCCSCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHSHCCCCCCCCCCCCCCCCCCC MSAAVACLDYFAAECLVSMSAGAVVHRRPPDPEGAGGAAGSEVGAAPPESALPGPGPPGPASVPQLPQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPCSELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAPAADQAPRRRSVTPAAKRHQCPFPGCTKAYYKSSHLKSHQRTHTGERPFSCDWLDCDKKFTRSDELARHYRTHTGEKRFSCPLCPKQFSRSDHLTKHARRHPTYHPDMIEYRGRRRTPRIDPPLTSEVESSASGSGPGPAPSFTTCL |
1 | 2ebtA | 0.54 | 0.16 | 4.74 | 1.46 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN-------------------------------------------- |
2 | 5v3jE | 0.20 | 0.16 | 5.14 | 1.68 | MUSTER | | -----------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTD-EKCFECKECGKARHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQM-SHTGEKPHKC--KECGKGFISDSHLLRHQSVHTGETPYKCK--ECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSH---SGEKPYECKECGKTF |
3 | 2jpaA | 0.40 | 0.15 | 4.38 | 1.90 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH---------------- |
4 | 5v3jE | 0.20 | 0.16 | 5.15 | 1.88 | SPARKS-K | | -----------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSIHTGEKPHKKECGKAFRYDTQLSLHLLTHAGARRFEDCDKVYSCASQLAGEKPHKCKECGKGFISD-SHLLRHQSVHTGETPYKC--KECGKGFRRGSELARHQRAHSGDKPYKCK--ECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----------------- |
5 | 2jp9A | 0.51 | 0.14 | 4.12 | 2.55 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT--------------------------------------------- |
6 | 2ebtA | 0.54 | 0.17 | 4.82 | 1.22 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------GSS------------------GSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN-------------------------------------------- |
7 | 5v3jE | 0.18 | 0.15 | 4.74 | 0.69 | CEthreader | | -------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCK--ECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----------------- |
8 | 2jpaA | 0.45 | 0.15 | 4.25 | 1.45 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK------------------------------ |
9 | 6xteA2 | 0.04 | 0.04 | 2.16 | 0.63 | EigenThreader | | KEFQQYLPVVMGPLMKTASIKPEACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHAAESMPLLLECARVRGPEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNLTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLIPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFCDNSPEVRQAAAYGLGVMAQYGGVRVIQSADSKTKENVNATENCISAVGKIMKFKP---DCVNLPLHEDKEEAVQTFNYLCDLIESNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTSLSPEQQAAI |
10 | 5ke6A | 0.61 | 0.16 | 4.52 | 2.50 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF--------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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