Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCHHHHHHHHSSSSSCCSSSSSSCCCCCCCCCSSCCCCHHHHHHHHHHHHCCCCCSSSCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCHHHHHHHSSSCCCCCC MEEEGVKEAGEKPRGAQMVDKAGWIKKSSGGLLGFWKDRYLLLCQAQLLVYENEDDQKCVETVELGSYEKCQDLRALLKRKHRFILLRSPGNKVSDIKFQAPTGEEKESWIKALNEGINRGKNKAFDEVKVDKSCALEHVTRDRVRGGQRRRPPTRVHLKEVASAASDGLLRLDLDVPDSGPPVFAPSNHVSEAQPRETPRPLMPPTKPFLAPETTSPGDRVETPVGERAPTPVSASSEVSPESQEDSETPAEEDSGSEQPPNSVLPDKLKVSWENPSPQEAPAAESAEPSQAPCSETSEAAPREGGKPPTPPPKILSEKLKASMGEMQASGPPAPGTVQVSVNGMDDSPEPAKPSQAEGTPGTPPKDATTSTALPPWDLPPQFHPRCSSLGDLLGEGPRHPLQPRERLYRAQLEVKVASEQTEKLLNKVLGSEPAPVSAETLLSQAVEQLRQATQVLQEMRDLGELSQEAPGLREKRKELVTLYRRSAP |
1 | 5jcss | 0.08 | 0.08 | 2.96 | 1.05 | SPARKS-K | | ISTVRINEDHQKDSSNKIYNL-----NMIG--MRIWNV--IELEEP-----SEEDLTHILAQKILTNLDSYKNVKSIYMNTKF----ISLNKGAHTRV---VSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGES--------LDIASSRISLFLTQHVPTLENLDDSIKKEKLNIQKKSMNSTLFAFTNAKMLAKKLTVINVSQQTETKPKTVAVPATFSLKHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLL--LDKWADFNDSVKKFEAQSSSIENSFVFNSDLLTEPDSRSILLSEKGDAEPIKAHPDFRINPATRDLPMGIRSRFTEIHSPERDITDLLSIIDKYIGKYNDIAELYLEAKKLSDNNTIVDGSNQKPHFSI--------RTLTRTLLYVTDIIHIYGDQKSEAILKPVIEKFTLGRLK |
2 | 1vt4I3 | 0.06 | 0.05 | 2.33 | 1.39 | MapAlign | | ---------------GGGGGGGGGGG--------GGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
3 | 6bbpA3 | 0.23 | 0.05 | 1.67 | 1.23 | HHsearch | | IENDL--LGNDLTHTFFNPDREGWLLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSI-REV-EDPRKPNCFELYNPSHKGHVVYRISAPSPEEKEEWMKSIKASISR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.07 | 0.07 | 2.93 | 0.64 | CEthreader | | LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5nnpA | 0.05 | 0.04 | 2.19 | 0.93 | EigenThreader | | RGLKAAEQILKKNPKHGDTMSMKALILNAQGEAFALAKEALTIDMKSYICWHVYGILYR----TNKNFDEAIKAYKFALKLE--------PESSLTTPPPKTDLEHSEALLYKNTIIAERLQHLETDCKHCLDRLAVMELRASYLSKLARKDEAAKAYRALLDRNPEHMDYYKGLISALDISADDKYPRSDAAKRLPLNFLSGERFRTTAKAYLTLMFDKGVPSTFANLKHLYSDSFKKETLASLAEEYLNEYVNARPSGSKGKGAALYYLAQHYNYYMSRDLTRALEYVEKAIELDPKNVDFHMTKARIFKHQGDLAKAAETMDYARSLDPKDRYINSKAAKYQLRNNENEKALATMGLFTRAETAGGPLADLTDMQCIWFLTEDGEGNTALALKRYHTVFSIFDTWQEDQFYFRAALDAVNLYLSMYDKPKDDDPNGEKLAADAMKFLNYILQFSDGQIAGFEVYIRKKKYLLALRCLKAASAIDKNH |
6 | 2kr0A | 0.15 | 0.10 | 3.44 | 0.71 | FFAS-3D | | LFPSLVPGSRGASNKYLVEFRAGYIQQTDDSLIHFWKDRTSGNVEDDLIIFPDD--------CEFKRVPQC--------PSGRVYVLKKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLN----------------------------------------------------------------NPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQ-------------------------------------------------VDLASVLT-------------PEIMAPILANADVQERLLPYLPSGESLPQTADEIFQQALGMFSAALALMCQVEAFAKAMQNNAKPEQKEGD---------- |
7 | 5h7iC | 0.11 | 0.09 | 3.13 | 1.03 | SPARKS-K | | -----------------------------------------------------------VPVIDLDEEQLLPVVRAILLQHDTFLLKN------------YANKAVLDALLAGLTT--KDLPDTSFDTLPLEDDVWLEQYIFDTDPQLRFDRKCRNESLCSIYSRLGLFFAQLCVKSVVSSAELQDCISTSHYATKLTRPCAKAIRYKPSTMATTDNSWVSIDEPQGMHTTSPLQIDPRANI-------VSLTIWPSILRLQDAMKFVKELFTVCETVLSLNALSRSTGV-PPELHVLLPQISSMMKR------KIVQDDILKLLTIWSDAYVVELNSRGELTMNLPKRDNLTTL---------------------------TNKSRTLAFVERAESWYQQVIASSQRQKRYQQFLAMKMTQVFDILFSLTRGQPYTET--YLSSLIVDSLQDSKEASEILAGLQGILPMDSLDKNRFSKLLQIHKSKQQ |
8 | 1u5eA | 0.20 | 0.04 | 1.30 | 0.65 | CNFpred | | --------------------KAGYLEKRRKFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYD-NNTLRKDGKKDCCFEICAP---DKRIYQFTAASPKDAEEWVQQLKFILQDLG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3ecqB | 0.07 | 0.04 | 1.68 | 0.50 | DEthreader | | -E--GT---QLSSTANDNAGKP-----------------DTKNNVFVWEYKT-S-T-WYRGR---LSITLLNASNVNLFDTVTLPVNLNEKKIL-NTH--------------------AYR--IA-NFGSQA---QNPFLTLDG--K-RIGGEDFKTL-LGIHVNA-SETYPESKYFDLHGRLA-------------------------------------------------------------------------------------------LGDGLDQGWRFASTFHANHQKDAWVGDYGAAPLLGFQHTPWNTDKKYYGKQTNPESGTLINDLVGVQNYAFSYGDFKQD------------------------EKHDPYT---------Q-R--GWNGKKVDDVIEWSLKT--LVYQTIPQNFRFEAGKTTGAETGDT--WV--G--IY-ST--AS-NTRGDSGGNA-FR-GY-NDF---T---N |
10 | 2pffB | 0.06 | 0.06 | 2.64 | 1.08 | MapAlign | | -----GGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLYKTSKAAQDVWNRADNHFKDSILDIVITIHFGGEKGKRIRLLSAQFTQPALTLMEKAAFEDLKSKALASLADVMSIESLVEVVFYRGMT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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