>Q8TD17 (151 residues) FNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCPHCGKSFIRK HHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDPSGQPPNPPGPL ITGLETSGLGVNTEGLETNQWYGEGSGGGVL |
Sequence |
20 40 60 80 100 120 140 | | | | | | | FNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDPSGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL |
Prediction | CCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCCSCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCSSCCCCCCSSC |
Confidence | 9742211212112368888037988765344310222221226888811798876524433410101233689880379888752443331323136767898812788887235543312211123699886568888655355531249 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | FNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDPSGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL |
Prediction | 7544341441333134333163674113033424044132313233326377411303343404413331333332636742230334240441332602222215474413102342403413331345331505441431344140306 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCCSCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCSSCCCCCCSSC FNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDPSGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL | |||||||||||||||||||
1 | 5v3gD | 0.47 | 0.31 | 9.07 | 0.83 | DEthreader | GFRKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTG--------------------------------------------------- | |||||||||||||
2 | 5egbA | 0.51 | 0.33 | 9.60 | 3.87 | SPARKS-K | FSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHT---------------------------------------------------- | |||||||||||||
3 | 2i13A | 0.40 | 0.33 | 9.77 | 0.82 | MapAlign | FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH------------------------- | |||||||||||||
4 | 2i13A | 0.32 | 0.31 | 9.38 | 0.64 | CEthreader | FSRSDHLAEHQRTH---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ | |||||||||||||
5 | 2i13A | 0.38 | 0.36 | 10.61 | 3.11 | MUSTER | FSRSDHLAEHQRTH---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDA---L | |||||||||||||
6 | 5v3jE | 0.43 | 0.28 | 8.34 | 1.25 | HHsearch | FRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------------------------- | |||||||||||||
7 | 5v3gD | 0.38 | 0.37 | 10.98 | 2.00 | FFAS-3D | FSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQR-THTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSH---- | |||||||||||||
8 | 5t0uA | 0.24 | 0.24 | 7.42 | 1.23 | EigenThreader | GRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYYICHARQSGTMKMHILQKHTENVAKPHCDTRKSDLGVHLRKQHSY-- | |||||||||||||
9 | 5egbA | 0.51 | 0.33 | 9.59 | 4.17 | CNFpred | FSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTH----------------------------------------------------- | |||||||||||||
10 | 2i13A | 0.47 | 0.30 | 8.87 | 0.83 | DEthreader | FSRSDHLAEHQRTH---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE-------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |