Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHCCCSSSSSSSSCCCCCCCSSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCCSSSSSSSCCHHHHHHHHCCCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHSSSSHHHCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCSSSSCCCCSSCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAAAVAAALARLLAAFLLLAAQVACEYGMVHVVSQAGGPEGKDYCILYNPQWAHLPHDLSKASFLQLRNWTASLLCSAADLPARGFSNQIPLVARGNCTFYEKVRLAQGSGARGLLIVSRERLVPPGGNKTQYDEIGIPVALLSYKDMLDIFTRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKRDDGPEKQEDEAVDVTPVMTCVFVVMCCSMLVLLYYFYDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRRELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKSRTSEEMGAGAPMREPGSPAESEGRDQAQPSPVTQPGASA |
1 | 6g2jM | 0.09 | 0.04 | 1.67 | 1.01 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------STPLIILTAWLLPLMLMAS------QNHLKKDNNVLQKLYISMLISLQILLIMTFSATE-------------------------LIMFYILFEATLIPTLIIITRWG-AGIYFLFYTLIGSIPLLIALILIQ-NNLLWLACMMAFLIKMPLYHLWLPKAHVEAPIAGSMILAA------------ILLKLGSYGMIRISIILDPLTKYMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIH--------------------------------------------------------------------------------------------- |
2 | 4hycA | 0.19 | 0.08 | 2.73 | 5.27 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------RD----------WLPLLGMPLMLLF-VQIIAIVMPMQAAG----LVAPSSVAN-PLIFIGMLLAFTLVL--LVLL-RTGGRRFIAAALFGSLLALGP---T---TAAAAGTLIGAVAVTALLYLYP--EWYVIDILGVLISAGVASIFGISEPLPVLVLLVLLAVYDAISVYRTK--------HMITLAEGV----------------------------GAFVMGMGDLIMPSILVVSSHVFLS------APTLGAMVGSLVGLAVLLYF-VNKGNPQAGLPPLNGGAILGFLVGAALA---------------------------------------------------------------------------------------------------- |
3 | 6lqgB | 0.15 | 0.09 | 2.98 | 0.62 | CEthreader | | --------------------------------------------------------------------------------------------LKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTY---------------NVAVDYITVALLIWNFGVVGMISIHWKGPLRLQQAYLIMISALMALVFKYLPEWTAWLILAVISVYDLVAVLCP----KGPLRMLVETAQERNE----TLFPALIYSST----------ERGVKLGLGDFIFYSVLVGKASATA---SGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQPFMDQLAFHQFYI-------------------------------------------------------------------------------------- |
4 | 6lcpA4 | 0.09 | 0.06 | 2.27 | 0.65 | EigenThreader | | ISLYISLEIVRTLQAFFIYS---DVGM--------YYEKIDQPCIPKSWNISDDV---------GQIEYIKTGTLTQNVDRLQDIKDVMTLSIGDG----ANDVAMIQEA--DVGVGIAGEEGRQAV--------MSSDFAIGQFRFLQRLVLVHGRWSYRRL----------AETISNFFYKNMIWTWSIFWYQCY---------------------------------------------------------------------------------------------------CNFDIA-----YIFEYTYILMFNLFF----TDQDVSDRKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVLVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYT-----------ATTYSAGFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIREQANRGDFAAADAAAVA----------------- |
5 | 3icuA | 0.17 | 0.04 | 1.40 | 0.92 | FFAS-3D | | ---------------------------AYLNVSWRVPHTGVLSEEGVYGQ---DSPLEPVAGVLVPPDGPGALNACNPTVWGSTVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKISIQRGIQVTMVI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6lqgB | 0.18 | 0.08 | 2.64 | 0.79 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKYGAKHVIMLFVPVTLCMVVVVATIKSV--SFYTRKDGDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKVVGMISIHLQQAYLIMISALMALVFIKYPEWTAWLILAVISVYDLVAVLMLVETAQER---------------NETLFPALIYSS----------TERGVKLGLGDFIFYSVLVGKASAT---ASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPI--SITFGLVFYFATDYLVQPFMDQLAFHQFYI------------------------------------------------------------------------------------ |
7 | 5xanA | 0.11 | 0.07 | 2.41 | 0.99 | CNFpred | | ---------AVQDRARSCIQQTA---RLEFRIVNSDAKPDPAVR----NPRSSGYT--LAQLGPVVATGE----TIADATSGTDQRSGQWVVNFKT--GAKTFGDFTGKNVNRLMAVVLDD-----------------QIQSVATI---------RLFRDIQISGN--FTPEEASQLACVLKSGALPIKIVTAAERSIGPSLGADAI--------------RSGAIAALVGIGLVFVMLFAYYGLWFGLVGALGLLFSSIIILGILATLTLPGIAGLVLTIGAAVDGNVISFERIKE---------------------------------------------ELARGKGIKNAIGAGYEH------------STAAILDVNASHLLSALALYNYSGAVKGFAVTLIIGVIASTFSNLVFWFMQWLAQR------------------------------------------------------------------------------------------- |
8 | 6ez8A | 0.08 | 0.05 | 1.91 | 0.67 | DEthreader | | -------------------------------LVPDVRVS-KA-----------------------LSCVGAAVALHPESFFSKLYYVSDLLCGTCSSRSRFHVGWMGIRTNTFDCILTAVRNCVMSLCSSSYSELG--L--DVL-LV--E------------------GAHHYT-----------------AP--SL-MSE------------SGGQKSALFEAAREVTLARVSGTVQQLPDLFGDAALYQSLPTLARALAQYLV-VVSKLPSHL-HLPPEKEKDIVKFV-------------V--A-------------TLEALSWHL-I----H---IP--L-AGLDCCCLALQLP---------------TPLLRNIIISLARLPLVNYPGDFG------L-WTSRSTPVAGSCLEQVPSLTGALISHKLQISIHSVWLGNSI-T-----------------VDIHSCSQFLLE-Y-SRWILTPAILISEVVRSLLVVS--QFLM-VTLT------ |
9 | 2pffB | 0.06 | 0.06 | 2.70 | 0.89 | MapAlign | | -PISCPLIGVIQLAHYVVTAKLLEGVPSPMLSISVNGAKNLVVRFLPVASPFHSGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTSKAAQDVWNRADNHFKDTYGFSILLSTQFTQPALTLMEKAAFEDLKSAALASLSLVEVVFYRGMTMQENQQYVAAGDLRSLSLEEVEGHLFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 3wajA1 | 0.13 | 0.11 | 3.77 | 0.65 | MUSTER | | ----SVLVIAALISVKLRILNPWNS------VFTWTVRLGGND--WYYYRLIENTIHNFPHRIWFDPFTY----------YPYGSYTHFGPFL------VYLGSIAGIIFS--------------ATSGESLRAVLAFIPAIGGYLLTREVFDKRAAVIAAFLIVPQRSILGFNDHHIWEAFWQVSALGTFLLAYN-------RWKGHDLTARQMAYPV-VLSWGAGFIIAPIILAFMFFAFVLARKNLSLVAVVTFAVSALIYLPFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFF--------ERVGLGRKGMPLAVIVLTALIMGLFFVLTNA-VLHFG-ALFFFGMAGILYSAYRFLKRRS-------FPEMALLIWAIAMFIALWGQ---NRFAYYFAAVSAVYSALALSVVFDKLHFRVAFALLPTYILADAQSSYAGGPNKQWYDALT---RENTPDGEKYDEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYAHRMPIANPFQA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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