Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCSSSCCCCCCCC SPPAIMHYSEHEAALLAEKLKDDSKFSEAITVLLSWIERGEVNRRSANQFYSMVQSANSHVRRLMNEKATHEQEMEEAKENFKNALTGILTQFEQIVAVFNASTRQKAWDHFSKAQRKNIDIWRKHSEELRNAQSEQLMGIRREEEMEMSDDENCDSPTKKMRVDESALAAQAYALKEENDSLRWQLDAYRNEVELLKQEKEQLFRTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKKSELEQAKEEQSHTQALLKVLQEQLKGTKELVETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIISTFLHVHPFGANIEYLWSYMQQLDSKISANEIEMLLMRLPRMFKQEFTGVGATLEKRWKLCAFEGIKTT |
1 | 3edvA | 0.11 | 0.08 | 3.02 | 1.11 | FFAS-3D | | ----------HMRHRLFQ-------LNREVDDLEQWIAEREAGSHELGQDYEHVTMLQERFREFARDGNIGQERVDTVNHTIAEWKDGLNEAWADLLELIDTRTQI-------LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRD---------------------QNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA----GDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFS-MVRDLMLWMEDVIRQIEAQEKPRD----------------------------VSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLRKHYASEEIKEKLLQLTEKRKE------------------------ |
2 | 3bzkA | 0.08 | 0.08 | 3.05 | 1.11 | MapAlign | | -------MDSINTRIAEELSALPSGVPQQVAAAVALLDEGSIARYRDTQLRMLEERLRYLRELEERRGAILASIEETKTRLEDLYLPYKGQIALELGALADALFESEAARFVDAEKFADVKAVLEGAKYILMERFAHPCEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGELRDGAEDEAISVFARNLHDLLQWDQTLAVLAALCDKLAGELIKKLRGAVSIARRLQLARSLDAVVEDCVNGLSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVQRIAADTERDIRSLFLKRLPKKFT--DETFGLPTVTDILKELIVKVKVMEVD-IPRNRVGLSMRMSDTPG-- |
3 | 6tpiA | 0.09 | 0.08 | 3.13 | 0.67 | CEthreader | | -----------LKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQL---------------------KQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTL--AGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQ |
4 | 5n4wA | 0.06 | 0.06 | 2.55 | 0.95 | EigenThreader | | KRVLESEEQVLVMYHRYWEE--YSKGADYMDCLYRYLNTQFIKKNPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNKVIHGVINSSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLRATSNLSVLEVHGKFVQLINTVLSALDKALTSVVPELLAKYCDNLLKEVEDRLTSFITVFKYFQKFYARMLAKRLIHDSEEAMINKLKQACKLHRMYTDMSVSADLNNKFNNFIKNQDTVSFQIYVLQAGAWISLLDVKMINESSFSLNMNFTDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSFNPSISMIKKCIEVLI----------DKYIERSQA----SADEYS |
5 | 1u4qA | 0.12 | 0.09 | 3.15 | 1.06 | FFAS-3D | | ----------------ANKQQ---NFNTGIKDFDFWLSEVELASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQVKDKRETINGRFQRIKSMAAARRAK-------LNESHRLHQFFRDMDDEESKEKKLLV-----SSEDYGRD-----------------LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEE-----IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVA-NVEEEEAWINEKMTLVASEDYGDT----------------------------LAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLKNNHHVENITAKMKGLKGKVSD------------------------ |
6 | 5j1iA | 0.11 | 0.10 | 3.48 | 0.88 | SPARKS-K | | ----------SRCQRCISELKDRLQLEACETRTVHRLRL-PLDK----EPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLPTLRSELELTLGKLEQVRSLAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA--------------QAVPA--TLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVE--VERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDS----QAVREQLRQEQALLEEIERH--------GEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQIQEYVDLRTHYSELTTLTSQYIKFISET------------- |
7 | 5j1iA | 0.10 | 0.07 | 2.69 | 0.90 | CNFpred | | -----------RCISELKDIR--LQLEACETRTVHRLRLPL------KEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKAAPTLRSELELTLGKLEQVR------SLSAIYLEKLKTISLVIRGTQGAELRAHEEQLKEAQAVPATLPELEA-----------TKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERD--VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-----------------------------DSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYIN--AIKDYELQLVTYKAQ--------------------------- |
8 | 1ciiA | 0.08 | 0.05 | 1.82 | 0.67 | DEthreader | | --------------------R----------------------------------GN-ADAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADA---DSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVT-SLT--ASANNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKAI-TRMAGQAKGKIRAKTKYESVEKANK------------------------------------------------------------------------------------------------------- |
9 | 6xteA | 0.08 | 0.08 | 3.07 | 1.11 | MapAlign | | LQDPHPRVRYAACNAVGQMAFQKKFHEKVIAALLQTME-DQGNQRVQAHAAAALINFVKHLHSIMVLKLQELQVVTSIASVADTAEEKFVPYYDLFMPSLKHIV-ENAVQKELRLLRGKTIECISLIGLAVFMQDASDVMQLLLKTQTDFPQISYMISAWARMCKILGKEFQQYLPVVMGPLMKTALEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMAAESMPLLLECARVRLTQMWHFMCDALIKAIVLSEIMHSFAKCIEVMELGGILKAKLEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVQLLPLIVNLIHRPWPDRGLCIFDDVIEHLRPMLQYVCDNSPEVRQAAAGLGVMAQYGG |
10 | 1sjjA2 | 0.10 | 0.09 | 3.45 | 0.79 | MUSTER | | QQKDYETATLSEIKALLKKHEA-AAHQDRVEQIAAIAQE-ELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAME-DTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERL--RKQFGAQANVIGPWIQTKMEEIGRIHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVQLLTTIARTINENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMEDFRACLISMGYNMGEAEFARIMSIV-------PNRMGVTFQA---FIDFADTDTA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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