Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCSSSSCSSSSSSCCCCCSSSSSCCCCCSSSSSCCCCCCSSSCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSCCCCCCSSSCCCCCSSSSCCCCCCCSSSCCCCCCSCCSSSSCCCCCCSSSSSCCCCSSSSSSCCCCCSSSSCCCCCCCSSCSSSCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCSSSSSCCCSSSSSCCCCCCCSCCCCCCCCSSSSSCCCCCSSSSSSCCCCSSSSSCCCSSSSSCCCCCCCCCCC MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP |
1 | 6iamA | 0.14 | 0.10 | 3.47 | 1.64 | SPARKS-K | | -------------------------TPVKPNYALKFTLA---GHTKAVSSVKFS-----PNGEWLASSSAKLIKIWGAYDGKFEKTISG-----HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-------IVSGSFDESVRIWDVKTGKCAHSDPVSAVHFNRDGS------LIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGK---------------------------------------YILAATL--------DNTLKLWDYSKGKCLKTGHKNEKYCIFA----NFSVTGGKWIVSDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPNIIASAALDKTIKLWKSDC------- |
2 | 4wjsA | 0.15 | 0.15 | 4.90 | 1.32 | MUSTER | | GKDLIIDQYPNDLLSLLNPFETTITLSAEPQAIFKVHAVSRLAHRIPGHGQPILSCQFSPVSSRLATG-SGDNTARIWDTDSGTP---KFTLKGHTGWVLGVSWSPDGKYLATCSMDTTVRVWDPESGQVNQEFRGHAKWVLALAWQPYHLW-RDGTARLASASKDCTVRIWLVNTGRTEHVSGHKGSVSCVKWGGTD---LIYTGSHDRSVRVWDAVKGTLVH-----NFTAHGHWVNHIALSSDHVLRTAYHDHTKEVPGTEEERRAKAKERFEKAAKIKGKVAERLVSASDDFTMYLWDPTNNGPVARLLGHQNKVNHVQFSPDGTLIASAGWDNSTKLWN---------ARDGKFIKNLRGHVAPVYQCAWSADSVVTGSKDCTLKVWNVTGKLAMDLP |
3 | 5o9zL | 0.14 | 0.11 | 3.75 | 2.07 | FFAS-3D | | -AYPDGSKEKRRAAIAQALA---------------GEVSQLSRHIKFGQKSHVECARFSPDGQYLV-TGSVDGFIEVWNFTTGKIRKAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFRAHSKGVTCLSFSKDSSQI-------LSASFDQTIRIHGLKSGKTLEFRGHSSFVNEATFTQDGH--YIISASSDGTVKIWNMKTTECSNTF----------------------------------KSLGSTAGTDITVNSVILL---PKNPEHFVVCNRSNTVVIMNMQGQISFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTG---------KLERTLTVHEKDVIGIAHHPHQIATYSEDGLLKLWK---------P |
4 | 6jlqC | 0.46 | 0.41 | 11.87 | 3.47 | CNFpred | | ----------NEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKR-CHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNIDKSRVTCVKWVPGSESL------FLVAHSSGNMYLYNVEHTCGTT-APHYQLLKQG------ESFAVHTCKSRNPLLKWTVGEGALNEFAFS------DGKFLACVSQDGFLRVFNFDSVELHGTM------KSYFGGLLCVCWSP-DGKYIVTGGED--------DLVTVWSFVDCRVIARGHGHWVSVVAFDRFGSVGQDTQLCLWDLLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFN- |
5 | 6p2kA | 0.05 | 0.04 | 1.72 | 0.83 | DEthreader | | ---------GSWDIGWYATPNTNQTNSTPTSQTYKGKGTES----TYTYDVAVHE------NYVIQGQADNGLMESWDG---GVSWSNMQHRRFNLSDVQAVDIADGVPTVVAQAANGRLWAKRLHADQWVELAGLPKGVLRDVAVSPANP------AKVFMFSSNYGMYMVEDIGRA-D------------------TNEKVVFFSTQGVWRGEQQNDGSWTF-AQV-LA--S--S---GW----------------DAEVEMSFAGGGPG-----------L-T-DGNNWQILLST----Q-----N----WQKIFTPADA-A-TGNRFKF--------YGVFLGT--Q--GQVNWQDITDDLHFSGMTSSRFIKMYLYSTTPGAGLWRRS-ISGMNMDPA |
6 | 2h9lA | 0.14 | 0.10 | 3.55 | 1.62 | SPARKS-K | | QGTQSKPTPVK------------------PNYALKFTLA---GHTKAVSSVKFS-----PNGEWLASSSAKLIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-------IVSGSFDESVRIWDVKTGKPAHSDPVSAVHFNRDGS------LIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGK---------------------------------------YILAATL--------DNTLKLWDYSKGKCLKTGHKNEKYCIFA----NFSVTGGKWIVSDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPNIIASAALDKTIKLWKSDC------- |
7 | 5a1uD | 0.08 | 0.07 | 2.90 | 0.42 | MapAlign | | -----EVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHSDYIRCIAVHPT---QPFILTSSDDMLIKLWDWD---KKWSCSQVFE-GHTHYVMQIVINPKNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK-----PYLISGADDRLVKIWDYQNK-TCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST-LNYGMERV-------WCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDYIIYTAMALRNK-------------SFGSAQEFAWADSSEYAIRESNSIVKIFKNFKEKK---- |
8 | 4wjsA | 0.13 | 0.12 | 4.16 | 0.28 | CEthreader | | PNDLLSLLQKHGVTNPFETTITLSAEPQAIFKVHAVSRLAHRIPGHGQPILSCQFSPVSSSR-LATGSGDNTARIWDTDSGTP-----KFTLKGHTGWVLGVSWSPDGKYLATCSMDTTVRVWDPESGKQVNEFRGHAKWVLALAWQPYHLW-RDGTARLASASKDCTVRIWLVNTGRTEHV--LSGHKGSVSCVKWGGTDLIYTGSHDRSVRVWDAVKGTLVHNFTAHGHWVN----HIALSSDHVLRTAYHDHTKEVPGTEEERRAKAKERFEKAAKIKGKVAERLVS--------ASDDFTMYLWDPTNNGSKPVARLLGHQNKVNHVQFSPDGTLIASAGWDNSTKLWNARDGKFIKNLRGHVAPVYQCAWSADSVVTGSKDCTLKVWNVRTGKLAMDL |
9 | 5mzhA | 0.12 | 0.11 | 3.86 | 1.29 | MUSTER | | LLDLTPDVDVEVLLSQIIRQEPLISENRRPALRQLKMLEFTLFKVLRAHILPLTNCAFNKSGDRFITG-SYDRTCKVWNTFTGEE---VFTLEGHKNVVYAIAFNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQST-------IIATGSMDNTAKLWDVETGQERATAGHRAEIVSLGFNTGGD--LIVTGSFDHDSRLWDVRTGQCVH-----VLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITASSDKTCRLWD---------CDTGECLQVLEGHTDEIFSCAFNYEGIITGSKDNTCRIWKALT------- |
10 | 3iytA3 | 0.15 | 0.13 | 4.33 | 0.78 | HHsearch | | NGHLLGRQPFPNIVGLCEPETSEVYQQAKLQAKNGMLYLEWI-NKK--AVYHACF---SEDGQRIASCGDKTLQVFKAETGEKLL-----EIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSHLLL-------ATGSSDCFLKLWDLNQKMFGHTNSVNHCRFSPDDK------LLASCSADGTLKLWDATSANERKSI-----NVKQF--FLNLEDPQERFLFDIHTSGLLGEIHTG-----HHSTIQYC--DFSQNHLAVVA--------LSQYCVELWNTDSRSKVARGHLSWVHGVMFSFLTS-SDDQ--TI------RLWETKKVCKNS--AVMNGNLKKIHVSPDFYVTVDNLGILYILQTLEH------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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