Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHSCCCCSSSSCCCSSSSSCCCCCCCCCSSSSSSSSSSCCCCCSSSSSSSSSSCHHHHCCCCCCCCCCCCCCCSSSSCCCCCCCHHHHCCSSSSSCHHHHHHHCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCSSCCCCC MTHTRRKSLPMLSSGLTGRREPLQMEDSNMEQGVEGVEPGMPESPGHLTGRRKNYPLRKRPLVPEKPKACKVLLTRLENVAGPRSADEADELPPDLPKPPSPAPSSEDPGLAQPRKRRLASLNAEALNNLLLEREDTSSLAGTRRSRAGDPHRSRDRDRATGGWSSSKKRPRLGDLGGGSRDLSPEPAPDEGPRRDGDPAPKRLASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAPKAPRPKWPKVNGKNYPKAWQGASSGEAAGPPGWQGCPDEPWPSATPCGPSVQPSHQPLSKALESPLGLRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQPSFPTPQLSPLPMPGNPADYNGLCVGPELTALGSFYLYCGQEGLQCGGYSPCPMLPEGKLSPVAAPHEEGLLLAPSSVPSGTPFQHPPWGSSRYCSSEDTGVNGYSICGVLPLSVTHAGTTCGGCPYKMPFAAEGCRSLGQLEFPLPEAGHPASPAHPLLGCPVPSVPPAAEPVPHLQTPTSEPQTVARACPQSAKPPSGSKSGLRTGSSCRHTARSKAARRPSHPKQPRVQRPRPRRRRRRRTNGWVPVGAACEKAVYVLDEPEPAIRKSYQAVERHGETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMAKRRGEGLPSRKTALVPPSADYSTPPHRTVPEDTDPELVFLCRHVYDFRHGRILKNPQ |
1 | 1vt4I3 | 0.09 | 0.07 | 2.69 | 1.30 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN--ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------- |
2 | 4kxfK | 0.06 | 0.05 | 2.37 | 1.05 | EigenThreader | | FLNFYPLGEDIDIIEKTFTEPIHRHHRQLTLGSLLEALKSPESGKGKSTLLQRIAMLWASGGCRALKGFRLVFFIHL---------------RSARGGLFETLYDQLLNIPDFISKPTFKALLLKLHKEVYNEFHPQNCPEIEALIKENHRFKNMVIV-TTTTECLRHIRHVGADMTEDSAKDLIEAVLVPDQVERLWAQIQESLFVVITCAIQMGRQEFQAHTQTMLFQTFYDLLIQKNSHRYRGGADFARSLDYCGDLALEGVFAHKFDFEPEHGSSMNEDVLVTIGLLCTAQRLKPTFHKSFQEYTAGRRLSSLLTSK----------EPEEVSKGNSYLNKMVSISDITSLYGNLLLYTCGSSTEATRAVMRHLA---------MVYQHGSLQGLSVTKRPRQEIQSLRNTTEQDVLKAINVNSFVECGINLFSESMSKSDLSQEFEAFFQGKENIPDYLFDFFEYLPNCASALDRATPPRAVSLFFNWKQEINKLNCAAMAGRLSSVLRTCKSPLT----TDDEQYITSVTGLQQLPGGLIDSLGNLKNLENLAEGLRSLKKMRLSDIGEGMDYIVKSLSEESCDLQ-------EMKLVACCLTANSVKVLAQNLHNLIKL---SILDISENYLEKDGNEALQELIGRLGVLGELTDVHTSLPKLLKQLEGTPGLAKNWRLRDEEIKSLGEFLEMNPLRDLQQLDLAGDGWLYFMNVFE----------------NLKQLVSTEEFLPDAALVRKLSQVLSKLTLLQEVKLTGWE |
3 | 2gsxA | 0.12 | 0.11 | 3.79 | 0.68 | FFAS-3D | | --------------------SPPPILNGRISYYSTPIAVGTV----IRYSCSGTFRL-----IGEKSLLCIT------------KDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHDSVTFACKTNFSM----------NGNKSVWCQANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYS-------CESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKEPPILRVGVTADEGYRLQGEIFCPSPPPILNGRHIGNSLANVSYGSIVTYCDPDPELIGESTVDSQKTGTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTIRCNAQGTWEPSAPVCEK-----ECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYCTSEGVWTPPVPQCKVAACEATGRQLLTKPQHQFVRPCGEGYKLSGSVYQECQGTIFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGY----KISGKEAPYFYND--TVTFKCYSGFTLKGS----SQIRCKADNTWDPEIPVCEKETCQHRQSLQELP-------------AGSRVELVNTSCQDQDAENGIWFKKIPLCKVIHCHEVSYE--CDQC-RSDSKGHGSWSGPSPQCLRSPPVTRCPNPEVKHSHNDIVYVDCNPGFIMNGSRVIR--- |
4 | 3gavA | 0.09 | 0.07 | 2.87 | 1.42 | SPARKS-K | | GYVTADGETSGSITCGKDGWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESTTGSIVC-------GYNGWSDLPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFS------------CKPTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYCNPRFLMKGPNKTTLPVCIV-------------EESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSTMIGHRSITCIHGVAIDKLKKCKSSNLIILEEHLKNKKEFDHNSNIRYRCRGKEGWIHTVCIN------GRWDPEVNCSMAQIQLCPPPPQIPNSHNMT-TTLNYR-DGEKVSVLCLIQEGEE-------ITCRWQSIPLVEKIPCSQPPQEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETC--YMGKWSSPPQCEGPPEISHGVVAHSYQYGEEVTYKFEGFGIDGPAIAKCLGEKWSHPPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYYK-MDGASNVTCINSRWTGRPTCRDTSCVNPPTVQNAYIVSRQMSKYP----------SGERVRYQCRSP-------YE--MFGDEEVMCLNPQCKDSTGKCGPPPPIDNGDITSFPLSV----------YAP-----ASSVEYQCQNLYQL-----EGNKRITCRNGKC----------------LHPCVISREENYNIALRWTAKQKLYSRTGE----SVEFVCKRGYRLSSRSHTLRTT |
5 | 2d1qA | 0.11 | 0.02 | 0.83 | 0.56 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVAPTNEITLRELVHSLGISK--PTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDGYQCLDTFIKRNTPPGFQASSFKTVEVDR-----------KEQVALIMNKGVQLTHENIVTRFSHARDP--------IYGNQVSPGTAVL--TVVPFHHGFGMFTTLGYLICGFRVVMLTKFD |
6 | 6tgbA | 0.08 | 0.04 | 1.60 | 0.50 | DEthreader | | --------------------I--------KKERFQ--GNKILELDLIATKITERIKEEMSKD-----Q--PGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------------------------------------------------------------------------------YDILVGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGG---------------------GGGGG----GGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGG-------------GGGGGGGG--------G-GGGGGGGGGGGGG-GGGG---------------------------GGSSELVDFLMET-----------------FIMFKDLIGKNVYPGDWMMSMQNRVFLILAVAFITQDLQLMRRLIGFSIR-----QNKICFPGMVGPILEMTLIPEAEL-K--I--FFDMMFKFEEIKERYMLVKLLFYNNREEMYIYLYKLTL--PSFLRNKVPGDDVKIQCFTVYSRPVRV-PENEFASMWIER-------------ISPKYEKAFFTEEYVR----------------------------------KMKVEKEY-------------------------------------------------------------------------------------------- |
7 | 2pffB | 0.08 | 0.08 | 3.18 | 2.39 | MapAlign | | 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 |
8 | 1zlgA | 0.07 | 0.05 | 2.21 | 1.13 | MUSTER | | -------------------------------AAGPGAAAARRLDESLSAGS---------VQRARCASRC-------LSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLEPCKE--------------SGDLRKHQCQSF-----EPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNE------------------VKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLE---SSKFNISIEPVIQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRW--------AAVNVHGTRGFTAPSKHFRSKDPSAPPAPANLRLANSTVNSDGSVTVLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLA-KPENLSAS----FIVQDVN-------------------ITGHFSKMAKANL-----------YQPMTG--------TWAEVTTESRQNSLPNSIISQSQIHYVLTVPN-----PSTLYRL------EVQVL----PGGEGPATIKTFPPSSAHRSHLKHRHSPERYGKPI------PLLGL-DSTRTGH |
9 | 6vilA | 0.26 | 0.05 | 1.58 | 2.83 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLWKWSGNPTQRRGMK-----KARKLFYKAIVRGKETLRIGDCAVFLSAGR-PNLPYIGRIESLWESW-GSNMVVKVKWFYHPEETKLGKRQ-SDGK--NALYQSCHEDENDVQTISHKCQVVGREQYEQMMR---GR--------------------------KYQ-DQQDLYYLAGTYDPTTGRLVTADG |
10 | 3pt6A | 0.08 | 0.07 | 2.99 | 0.90 | CEthreader | | DCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTVLGATSDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGGKTYFFQLWYNQEYARFESPPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGLPKLRTSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTGNRHNHWANPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGN-AVPPPLAKAIGLEIKLCLLS---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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