Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHSHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCC MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVDILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLNLNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVGTPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQKKISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE |
1 | 1vt4I3 | 0.05 | 0.05 | 2.33 | 1.34 | MapAlign | | ---ICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 2pffB | 0.16 | 0.14 | 4.54 | 1.11 | HHsearch | | ------------------------------MDAYSTRPLTL-SHGSLEH--VLLV-----PTASFFIASQLQQFNLPEPTEAADDEPTTPAELVGKF----L--GYVSSLVEPSKVQVLNLCLTEFENCNDIHALAAKLLQENDTTLVKTKELI--KNYITAR----IMAKRPFDKKSNSALFRAVGEAQLVAIFGQGNTDLRDLYQTYHVLVGDLIKELILDAEKVFTQG-----L------NILEWLENPSNTPDKYLLSIPISPLQAHYVVTAKLLGELRYLKATGHSQGDSWESFVRCYEAYPNTSLPILEDNNEGVPPMLSISNLEQVSHLPAGKQV--EISLVNGAKNLVGPPQRKAKAPSGLDQSRIPFSERKLKSNRFLPVASPFHSHLLLINKNVSFNAKDIQ-IPVYDDGSDLRVLSGSISER------IVDCIIRLPVKWETTTQFKATH |
3 | 6fkkA | 0.05 | 0.04 | 2.00 | 0.70 | CEthreader | | YAFADGHLYSATVADFSGGDPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQAISPIVE--SGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISE------------------------------------MQVLPLGTPIRELVISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQSLNSTKKAAALLCPH----------------------------------------- |
4 | 5gm6G | 0.04 | 0.04 | 1.97 | 0.75 | EigenThreader | | HKILVVAAPLLIDEDPMVRSTGQEIITNLSTVANEDEYVRNVTSRAAAVVAKALG------VNQLLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVSCIKDCLMDDHPYGIEVFGIRSHRGKVLSSFLKAV-----GSMIPLMDPEYAGYYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTATPILRNKHRKVEVNTIKFVGLIGKLAPPKEWMRICFELLELLKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYLVHRQTASNVITHLALNCSGTGHNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWA |
5 | 5h7iC | 0.13 | 0.11 | 3.74 | 0.54 | FFAS-3D | | -----------------------------------------------DEEQLLPVVRAILLQHDTFLLKNYANK------------AVLDALLAGLTTKDLPDTSTLPLEDDVWLEQYIFDTDPQLRFDRKCRN-------ESLCSIYSRLFKLKSVVSSAELQDCISTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDEPDCTLLARWSQGMHTTSPLQIDPVSLTIWPSILRLQDA---MKFVKELFTV-------------CETVLSLNALSRSTGVPPELHVLLPQISSMMKRKIVQDDILKLLTIWSDAYVVELNSRGELTMNLPKRDNLTTLTNKSRTLAFVERAESWYQQVIASSQRQKRYQQFLAMKMTQVFDILFSLTRGQPYTETYLSSLIVDSLQDSTKEASEILAGLQGIRWNDKNRFSKLLQIHKSKQQD------- |
6 | 5yfpF | 0.09 | 0.09 | 3.36 | 0.95 | SPARKS-K | | KVVRILELSSKCQELITERKFFKVLQNLDSLEKLYQEFKNYNFQFLIEIYNSIP-------FRNSLNLNLGKNLIKFVAIYENELLPQWLETRSKMKLTNFKFNSPIEISMRDESFLAKLNLGEFFQIFQNLN---------ELSVLSGEFNKEYELRKTKLMYPLIWKKNKFTQSLSLHFYDINLNKATEFILVDNNYNSTNEFWDGLMDRLSPYLSFIDEKLKTEEDMIKLKDFLCIYVAI--LENFKLNIEPLYKILVSIFEKFCSVSLRAFDDEFQILLNDDDFMPLSINDKTLYEKVLKICWLYPMTCTLAKKTYSKITAFLSIFYRHELHTLNNILVKTMDDIFNDIVNKKIRSKLESTSREEIAQILVNLDYFIIAAKEFSNFMTRENILQNPDMEIRLSIKYLAESRKLAETKLIELIDSKISDDIS--IIDLAQFLEMMFASTLQNLPYSVQ |
7 | 3qfcA | 0.16 | 0.05 | 1.66 | 0.37 | CNFpred | | --------------------------------------------------------------------------------------------------------------------LELDISDSKIRYES---GDHVAVYPANDSALVNQLG------------KILGADLDVVMSLNNLDEESNKKHPCPTSYRTALT----YYLDITNPPRTNVLYELAQY----ASEPSEQELLRKMASS-SGEGKELYLSWVVEARRHILAILQDCPSLRP--PIDHLCEL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6bcuA | 0.08 | 0.05 | 1.90 | 0.67 | DEthreader | | -FELERKGGIAIARIGFALRLEMASKAIGRLAMA-----------------------YVEFEVKRALELGRAVLLRELAI--S----------------------------VPTFFFQPFNI-V---------------C--T---------------EMQKPQWYTFLILNEVLPRALVMRDLRQIP----------------------GSFETCSRLLTPSVAVVRFDAHLAQAENLQALFVALNDQVFIRELAICTVGR----------LHQDLVIYKLMVRSLPDTWLKYASLALYAYMKWAFLEWQLNQGINESAHYQNLTLYTART-LVLLLS---LLAL----EVWFDRRTNYLDRGKILNAMEVTGLDGNYRITCHTVMVLEHK-SVMAVLEFVYDPLNWRLA-------------------------------------------------- |
9 | 6fkkA | 0.06 | 0.06 | 2.41 | 1.24 | MapAlign | | IYNVSLNGLKEIARLEWHSTDADRELCALWDCHNYLRVYALRPNGEVLLCGTNSYKPRCRHYTHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLY----------------SATVADFSGGDPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSR----------------------VARVCKNDRGGPYSHGKSFLKARLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAPGQCVEDSRTLTSIAVNFIKNRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTRLKTVVISEMQVLPLGTPIRELVISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLGCLQTHECKNLATSQHKFGTKTYLQSLNSTKKAAALL---------------- |
10 | 1zvoC | 0.11 | 0.11 | 3.95 | 0.66 | MUSTER | | LQLESGPGLSETTCIVSGGPIRRTGYYWGRQPPGKGLEWIGGVYYTVDTSRNQFSLNLMSAADTCANPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLALITGYHPTSVT---VTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKK-EKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKAT-----FVVGSDLKDAH-------EVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLSGFSPPNILLMEDQREVNTSGFAPARPPPQPGSTTFWAWSVRVPAPPSHEDSRTLLNASRSLEVSYVTDHGPM- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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