Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC MSVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQKKSV |
1 | 1j2mA | 0.47 | 0.28 | 8.29 | 1.36 | FFAS-3D | | --------------------------------GPGGSPGG------------------------LQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGREADMP-DEVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
2 | 2rltA | 0.42 | 0.25 | 7.30 | 1.46 | SPARKS-K | | --------------------------------------------------------GPGGSPGGLQKRHARV-VKYDRRELQRRLDVEKWIDGRLEELYR-GREADMPDEVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
3 | 1j2mA | 0.44 | 0.27 | 7.80 | 1.40 | MUSTER | | --------------------------------------------------------GPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGREADMPD-EVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
4 | 1j2mA | 0.45 | 0.27 | 7.96 | 4.86 | HHsearch | | --------------------------------GPG------------------------GSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGREADMPD-EVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
5 | 2w4mA2 | 0.14 | 0.07 | 2.29 | 0.62 | CEthreader | | ------------------------------------------------------------------------------DTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFTDLRTSHWEEAIQETKGANRKLAEECYFLWKSTRLQHM------ |
6 | 1n4mA | 0.07 | 0.07 | 2.95 | 0.68 | EigenThreader | | IFKEKFAKAVGAGCVAIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLN---DNIFHMSLLACALEVVMATYSRSTSQVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLRHLDQIMMCSMYGICKVKNIDLKKIIVTAYKTNILQYASTRPPTLSP |
7 | 2rltA | 0.44 | 0.26 | 7.63 | 1.34 | FFAS-3D | | --------------------------------GPGGSPGG-------------------------LQKRHARVVKYDRRELQRRLDVEKWIDGRLEELYRGRE-ADMPDEVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
8 | 1j2mA | 0.44 | 0.27 | 7.80 | 1.44 | SPARKS-K | | --------------------------------------------------------GPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRGREADMPD-EVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
9 | 1k5oA | 0.51 | 0.26 | 7.55 | 0.96 | CNFpred | | -----------------------------------------------------------------------VTVKYDRRELQRRLDVEKWIDGRLEELYRGREADMP-DEVNIDELLELESEEERSRKIQGLLKSCTNPTENFVQELLVKLRGLHK--------- |
10 | 3nz4A | 0.09 | 0.07 | 2.76 | 0.83 | DEthreader | | -FCVIFQSREYYS-I---------QDRY-ALRSSPQWLGLGLLFAQFT-EL--I---E--Y--YSN-----L-MCQAVDLRQLEEALVKVVENVVSTALPNDKARLYVAAVPVYTYL-E--S--PCDLLLLGLKQSCLFEKRLSDRLENEMTARVYEKTGVQEDV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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