Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCHHHHCCCCCCCCCSSCCCCCCSCCCCCCCCHHHCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSSCCCCCHHHSCCCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCHHHHCCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCCSCCCCCCSSCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCCCCCCCCCCSSCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCCSCCCCCCCSSHHHSSCCCCC QADAEKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENVPKYQCPHCATIIARKSDLRVHMRNLHAYSAAELKCRYCSAVFHERYALIQHQKTHKNEKRFKCKHCSYACKQERHMTAHIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKCGKGFSRWINLHRHSEKCGSGEAKSAASGKGRRTRKRKQTILKEATKGQKEAAKGWKEAANGDEAAAEEASTTKGEQFPGEMFPVACRETTARVKEEVDEGVTCEMLLNTMDK |
1 | 3cmuA | 0.06 | 0.05 | 2.03 | 0.83 | DEthreader | | -IGTFIDAEHALDPIYARKGDVETISGLDIAGGLPMGR-QVIAAAQREGKTCAFILPARGVD--NLL-CSQPDTGEQALELTPKAEIE--AARMMSQAM-----MKIGVMFGNPETTTGNLK--R-DIR----RIGAVKENVVGSETRV-FQILYGE-----DVETISTLDILGAGGLPMVVIAAAQKTCAFIAPDTGEQALCIVV-DSVAALTPEI-IGD------------QIRM--N---------RIGAVKEGENVVGSETRFQILNGGKANTAWLK---------------------G--R-MDVETISTGS---DIALGAGGLPVI--TTLTLIAVDIDNGELGMDVETLPMGRIVEIYKTTAFIDAEH---ALDPIYARKLGV----------DI-NLLCS--A-IC-ALARSGAVDSNTLL |
2 | 5v3jE | 0.34 | 0.22 | 6.56 | 1.15 | CEthreader | | -------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRV-HTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGE--KPHKCKECGKGFISDSHLLRHQSVHT--GETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE----KPYECKECGKTFGRGSELSRHQKIHT---------------------------------------------------------------------------------------------- |
3 | 1vt4I | 0.05 | 0.05 | 2.30 | 1.89 | MapAlign | | EEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
4 | 5v3jE | 0.28 | 0.17 | 5.20 | 1.63 | EigenThreader | | -------PHKCKECGKAFHTKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFK---DCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGD------------------------------------------------------------KPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG---EKPYECKECG-KTFGRGSELSRHQKIHT---------------------------------------------------------------------------------------------- |
5 | 2pffB | 0.05 | 0.05 | 2.25 | 1.42 | MapAlign | | ---ADDEPTTPAELVGKFLGYVSSLVEPSKFLTARIMAYVVTAKLLGFTPGRTAVAIAETDSWESFFVSVRKASPMLVEISLVNLVVSGSPFHSRLPVKWETTILDFGGVGTGVRVIVANPDDDYGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKASLVEVVFYRGMTMQVVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTIIELQKSLSLEEVEG |
6 | 5v3jE | 0.33 | 0.21 | 6.37 | 2.76 | FFAS-3D | | ---------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRI-HTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGET--PYKCKECGKGFRRGSELARHQRA--HSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------------------------------------------------------ |
7 | 5v3jE | 0.33 | 0.21 | 6.44 | 4.46 | SPARKS-K | | -------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHT-DEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGE--KPHKCKECGKGFISDSHLLRHQSVHTG--ETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG----EKPYECKECGKTFGRGSELSRHQKIHT---------------------------------------------------------------------------------------------- |
8 | 5v3mC | 0.32 | 0.21 | 6.31 | 5.97 | CNFpred | | ---------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQR-IHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTG--ETPYKCKECGKGFRRGSELARHQRAHS--GDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------------------------------------------------------ |
9 | 5v3jE | 0.33 | 0.21 | 6.37 | 3.32 | MUSTER | | ---------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRI-HTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGET--PYKCKECGKGFRRGSELARHQRAH--SGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------------------------------------------------------ |
10 | 5v3jE | 0.32 | 0.21 | 6.25 | 2.70 | HHsearch | | ---------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQR-IHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTG--------------------------------ETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEK----PYECKECGKTFGRGSELSRHQKIHT---------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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