Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580
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| SS Seq | CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC MSVHQIRKHAVLPPIICRSDKEFLESVQRYIITETERLGCSEEGPADEYYIIYRNVFDKVIEHITAYKSILTSIKKEYDAFIETIKKDRRTTFCLHGKLKGLAAEPTALVYYRKRTIQLEAKMRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFNELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFPCPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLALAQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTKELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEVANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW |
1 | 5o9zG | 0.08 | 0.08 | 3.02 | 1.51 | FFAS-3D | | -DLNSMIPTHGGDINDIKKARLLLKSVPAWIASARLEE---VTGKLQVARNLIMKGTEAVVAQAVRHLPRAAELETDIRAKKRVLRKEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKTAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQWIQECDRAGSVATCQAVMRAVIGHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESE------NDEYERARRLLAKA-RSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRH-----YEDFPKLWMMKGQIEEQKEMMEKAREAYNQHSTPLWLLLSRLEEKIGQ-----LTRARAILEKSRLKNPKNPGLWLESVRKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLWSQRKITKAREWFHRTVKIDSD------------LGDAWAFFYKFELQHGTEEQQEEVRKRCESAKDIANWQKKIGDIGRIKNTF- |
2 | 5uwtC | 0.08 | 0.07 | 2.77 | 1.26 | CNFpred | | -----------------GNDQSFLQDLAMFLTTYLARN-RALLESDESLRELLLNAHQYLIQLSKEERELFKTTLDYWHNLVADLFYE-IYEEICSQLRLVIIEESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLS--------WAIGSISGTMSEDTEKRFVVTVIKDLLGLCEQKR----GKDNKAVVASDIMYVVGQYPRFLKA--HWNFLRTVILALFEFMHETHE-GVQDMACDTFIKIVQKCKYHFVIQQPRES----------EPFIQTIIRDIQKTTA-HTFYKACGIIISEERSVAERNRLLSDLM---------QLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIK--TNVAVCTSMGADFYPQLGHIYYNMLQL----------YRAVSSMISAQVAA-TKTPKVRGLRTIKKEILKLVETYIARNLDDVVKVLVEPLLNAVLEDYMNNDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVF----ECTLDMINKDFPEHRVEFYKLLKVINEK-PPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVK |
3 | 5mpbN | 0.08 | 0.08 | 3.10 | 1.11 | MapAlign | | ------TAAPLLALLRENQDSVKTYALESINPDIEALYDDDTFSDREMAALIASKVYESAVKYALATIVSKSIEMYVQEASKQYTKIDPKLTSIFERMIEKCLKASELKLALGIALEIIESALKSKSTSENVKIINYLLTLAITTRSSILRKSFDFLMNMPNCDYLTLNKVVLNDAGLALQLFKKLKEELSAQIAFDLVSSASQQLLEILVTELTAQGYDPALLNILSGLPTCDYYNTFLLNGLLNKSKSDGKFSLFHTAVSVANGFMHAGTTDNSFIKANLPWLGKAQNWAKFTATASLGVIYLPGSRKGGSLYGLGLIYAGTTL-KNIIVENSGTSGDEDVDVLLHGASLGIGLAAM----GSANIEVYEALKEVLYATSGEAAALGMGL-CMLGKPEAIHDMFTYSTQHGNITRGLAVGLALIMLESLLRYGGAFTIANNSAVKRLLHVAVSDSNVRRAAVIALGFVLLVPRIVQLLSKSHNAHVRCG-TAFALGIACAGKGLQSAIDVLDPLTFVRQAAMIALSMILIQQTEADINKNFLSVITGLAKFGACVAQGIMVGLVMFSQFWYWFPLAHFLSLSFT |
4 | 1xi5A | 0.21 | 0.14 | 4.38 | 3.03 | HHsearch | | KVSQPIEGHAGNQPFPKKA----------------VDVFFPPEAQNSEKHDVFKYGYIHLYDLET-----------------------------------------GTCI-YM-------N----------------------R--ISGETIATAGIGVNRKGQVLSVCVEEENIIPYITN--------------------V-----------------------LQNPDL------------ALRMAVRN-------------------------------NLAGA----E--ELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQ----G-QLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVD----------PTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKV-GYTP-DWIFLLRNSPGQQFAQMLVQD---EEPLADITQIVDVFMEYSEGPLQTRLLEMNLMHA-PQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIVHTHLLNPE----WL-VNYFG |
5 | 4ui9X | 0.08 | 0.06 | 2.53 | 0.52 | CEthreader | | ---------NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALLP-SEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWIKAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYGYL-LAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPC-----------------RLDCYEGLIECYLASNSI---REAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLNKALTQEP------DYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALSLDP----------------------------------------------------------------- |
6 | 6wcjL | 0.07 | 0.06 | 2.67 | 0.92 | EigenThreader | | EDVIKNLILVVRGQFSTDELVAEVEKRNKLLLPWLEARIHEGCEEPATHNALAKIYIDSNRFLREYDSRVVGKYCEHLACVAYERGQCDLELINVCLSRYLVRRKDPELWGSVLPLIDQVVQTALSEEVSVTVKAFMTADLLEKIVLDNS----VFSEHRNLQNLLILTAIKADRTRVMEYINRIANIAISNEAFAIFRKFDVNTSAVQVLIEHIDRAYEFAERCAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAAN---TSGNWEELQMARKKARESYVETELIFALAKTGDRCYDEKMYAKLLYNNVS-----NFGRLASTLVHLG------EYQAAVDGARKAN----------STRTWKEVCFACVDGKEFRLAQMCGL--HIVVHADELEELINYYQDRGY----FEELITMLEAALGLFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKY----EEYDNAIITMMNHPTDAGQFKDIIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKV---KQL----PLVKPYLRSVQN---HNNKSVNESLNNLFI |
7 | 4iggA | 0.13 | 0.12 | 4.07 | 1.49 | FFAS-3D | | ----------------SSVKRGNMVRAARALLSAVTRL-----------LILADMAVYKLLVQLKVVEDGILKLRQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASKQLQQAVTGISNA---------AQATASDDASQHQGGGGGELAYALNNFDKQIPSLEERLESIISGAASSCTRDDRRERIVAECNAVRQALQDLLSESDALNSAIDKMTKKTRDLRRQLRLETNVPLLVLIEAAKNGNEKE-VKEYAQVFRENNEEGVKLVRMSASQLEALCPQV-----INAALALAAKPQ----SKLAQENMDLF---------KEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEGRAARVIHVVTSEPGVYTEKVLEATKLLSNTQPMDENEFIDASRLVYDGIRDIRKAVLKIAEQVAQEEKSKLDAEVSKWDDNDIIVLAKQ--MCMIMMEMTDFTRGKGPLKNTSDVISAAKDSACKQDLLAYLQRIAL----YCHQLNIELVVSGVDSAMSLIQAAK-----NLMNAVVQTVKAYVASTKYQKSQGMASLNLPVSW |
8 | 3c2hB | 0.09 | 0.08 | 2.99 | 0.94 | SPARKS-K | | KTIRTWIRQDKFAQVDQANMPNCVQQILNIIYDGLK--PQPVQLP-ISYYAQLWYNLLDILRRFTFLPII-----SPYIHQVVQMENGPQDFRELICNLLNWQKDPH----MKHCANQVFQIFNCIIMGVEKLRTEFAQHLKF-EKLVGTLSEYFN----PQVHPGMINP-------AIFIIFRFIIRLKDYFIWNNNPHPPPTGLIIKLNAVMIGSYRLIPETLPQNPELAHLIQVIIRTFDLLGLLLHD------SDAIDGFVRS------DGVGAITTVVQYPNNDLIRAGCKLLLQVSDALAKTPLENILPFLLRLIEIH------------------PDDEVIYSGTGFLSNVVAHKQ--------HVKDIAIRSNAIFLLHTIISKYPR---------LDELTDAPKEIICNCLRTLNNFLMMWGPNEKQQVCKFIEIDILKKLMSCLSCEGMDTPGLLELRSTILRSFILLLVLNVIDENRKENLIGHICAAYSWVFKQQLVERTISLLLVLMCGAEKEVAQYSYSIDC-----PLNLLNGNQVKP--TFIHNVLVVCDKILEHCPTRADIWTIDRPML |
9 | 4gmxC | 0.11 | 0.09 | 3.10 | 1.24 | CNFpred | | --------------------IQLYKSEREVLVYLTHL-------NVIDTEEIMISKLARQID-INTLSWAIGSIS-TEKRFVVTV------IKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHE------------------------HEGVQDMACDTFIKIVQKCKYHFVIQQPRESE---------PFIQTIIRDIQKTTADL-QPQQVHTFYKACGIIISEER---SVAERNRLLSDLMQLPN-----MAWDTIVEQS--DSETVKIIANIIKTNVAVCTSMDFYPQLGHIYYNMLQLYRVSSMISAQVAAEGLIATKTPKVRGLRTIKKE------------ILKLVETYISKANLDDVVKVL-------VEPLLNAVLEDYMNNDARDAEVLNCMTTVVEKVHMIPQGVILILQS-VFECTLDMINKD-PEHRVEFYKLLKVIN-EKSFAAFLEL---PAAFKLFVDAICWAFKHNNRDVEVNGLQIAL----DLVKNIERMG------NVPFANEFHKN-YFFIFVSETFFVLTDSDHKSG---FSKQALLLMKLIS |
10 | 7blpA | 0.06 | 0.04 | 1.62 | 0.83 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------RL-ED-LI--R------------------------------------AVFDALRYLSATTLGQARDLFILNFILSILGPLLETLDQFLGAV---------------------------------VPLYDIFFDQVQHVQQHLPDTIALCCSLANLSLNIYP--ERLDYVDGILAALVSLLSLLQSPLRRYVSI------FTALSLPTYVSLFQAQTYTRIAGEIVRTLLQTLISTPALENVLEILKVLIKGEMEEWLARLVHLIHSDDTQFRLLQMTRKAYAEGNERIRTTTPPLITGLFLHSAISTLYTRVNGPGVADLCLRLFCSCGAVAYEFFAQAFTVYEESIQFQAVCVIAS--ALHRTRNFGRENYDTLITKCAQHASKLDQRAVYLASHLWATPARTELYRDGKRVLECLQRARVADSCMETSILFVEILRYSV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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