Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHSHSSSCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCSSCCHHHHHHHHHCCCCCSSSSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCSSSSSSCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHCCSSSSSSCCSSSCC MRQNNNITEFVLLGFSQDPGVQKALFVMFLLTYLVTVVGNLLIVVDIIASPSLGSPMYFFLACLSFIDAAYSTTISPKLIVGLFCDKKTISFQGCMGQLFIDHFFGGAEVFLLVVMACDRYVAICKPLHYLTIMNRQVCFLLLVVAMIGGFVHSAFQIVVYSLPFCGPNVIVHFSCDMHPLLELACTDTYFIGLTVVVNSGAICMVIFNLLLISYGVILSSLKTYSQEKRGKALSTCSSGSTVVVLFFVPCIFIYVRPVSNFPTDKFMTVFYTIITHMLSPLIYTLRNSEMRNAIEKLLGKKLTIFIIGGVSVLM |
1 | 2ks9A | 0.13 | 0.12 | 4.28 | 1.33 | DEthreader | | --L--STNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP-L-QPRLSATATKVVICVIWVLALLLAFPQGYYSTTETM----PSRVVCMIEWP---EHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWSSDRSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPPLFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRPFISAGDY------- |
2 | 4n6hA2 | 0.15 | 0.13 | 4.50 | 2.10 | SPARKS-K | | ---------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMA---------VTRPRDAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------- |
3 | 3dqbA | 0.14 | 0.13 | 4.52 | 0.66 | MapAlign | | ----VVRSPFEAPQYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLGWSRYIPE----GMQCSCGIDYYTPHEETNN---ESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFIFTHQGSDFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------- |
4 | 2ziyA | 0.15 | 0.14 | 4.83 | 0.39 | CEthreader | | YNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAY---TLEGVLCNCSFDY-----ISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETED |
5 | 6me2A2 | 0.14 | 0.13 | 4.31 | 1.61 | MUSTER | | ----------------RPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVANLVVAIYPYPLVLMSIFNNGWNFGYLHCQVSAFLMGLSVIGSIWNITGIAIDRYLYIH-SLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAGTLQYDP----RIYSCTF---------AQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQV-RGIDFRNFVTMFVVFVLFAICFAPLNFIGLAVPRIPEWLFVASYYMAYFNSCLNPIIYGLLDQNFRKEYRRIIVSLCTARVFF------ |
6 | 6kp6A | 0.19 | 0.16 | 5.24 | 1.31 | HHsearch | | ------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGK-RTVPDNQCFAQFL---------SNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ------------- |
7 | 3emlA1 | 0.16 | 0.14 | 4.55 | 2.13 | FFAS-3D | | ---------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNCGQSQGCGEGQVACLFEDVVPM--------NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV------------ |
8 | 2ks9A | 0.14 | 0.13 | 4.57 | 0.98 | EigenThreader | | LSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQ----GYYSTTETMPSRVVCMIEWPEHPNKIYEKVY---HICVTVLIYFLPLLVIGYAYTVVGITLWASEISAKRKVVKMMIVVVCTFAICWLPFHIFFLLLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEM |
9 | 4ww3A | 0.16 | 0.15 | 4.85 | 1.67 | CNFpred | | -------------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE---GVLCNCSFDYISR-----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSN-GANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETED |
10 | 2ziyA | 0.16 | 0.15 | 4.98 | 1.33 | DEthreader | | ---YNPSIIVHWRFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRMAASK-KMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTL---EGVLCNCSFDYI---S--RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEQNAEMRLAKISIVIVSQFLLSWSPYAVVALLAQLVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFD--ETED |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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