Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCCSCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHSSSSSCCCCCCCCCCCCSSHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCC MRNGTVITEFILLGFPVIQGLQTPLFIAIFLTYILTLAGNGLIIATVWAEPRLQIPMYFFLCNLSFLEIWYTTTVIPKLLGTFVVARTVICMSCCLLQAFFHFFVGTTEFLILTIMSFDRYLTICNPLHHPTIMTSKLCLQLALSSWVVGFTIVFCQTMLLIQLPFCGNNVISHFYCDVGPSLKAACIDTSILELLGVIATILVIPGSLLFNMISYIYILSAILRIPSATGHQKTFSTCASHLTVVSLLYGAVLFMYLRPTAHSSFKINKVVSVLNTILTPLLNPFIYTIRNKEVKGALRKAMTCPKTGHAK |
1 | 4zwjA | 0.14 | 0.13 | 4.41 | 1.33 | DEthreader | | EGPN--SPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCK-PMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP-----LQCSCGIDYY-T-L--KPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAQSTQKAEKEVTRMVIIYVIAFLIWVPYASVAFYIFQSCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKN---- |
2 | 4n6hA2 | 0.13 | 0.12 | 4.21 | 2.18 | SPARKS-K | | ---------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG---AVVCMLQFPSP------SWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG---- |
3 | 3dqbA | 0.15 | 0.14 | 4.85 | 0.66 | MapAlign | | NKTGVVRSPFEAPQYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP--MSNFFGENHAIMGVAFTWVMALACAAPPLWSRY------IPEGMQCSCGI---DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYATHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
4 | 3dqbA | 0.13 | 0.12 | 4.34 | 0.38 | CEthreader | | KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP----EGMQCSCGI---DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAATQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
5 | 6me2A2 | 0.17 | 0.15 | 5.05 | 1.62 | MUSTER | | ----------------RPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVANLVVAIYPYPLVLMSIFNNGWNFGYLHCQVSAFLMGLSVIGSIWNITGIAIDRYLYIH-SLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAG-TLQYDP----RIYSCTFAQ---------SVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRGID--FRNFVTMFVVFVLFAICFAPLNFIGLAVMVPRIPEWLFVASYYMAYFNSCLNPIIYGLLDQNFRKEYRRIIVSLCTARVF |
6 | 6kp6A | 0.17 | 0.15 | 4.96 | 1.33 | HHsearch | | ------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKR--TVPDNQCFAQFL---------SNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ------ |
7 | 3emlA1 | 0.17 | 0.15 | 4.87 | 2.30 | FFAS-3D | | ---------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPM---------NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ-- |
8 | 2ks9A | 0.14 | 0.14 | 4.69 | 1.00 | EigenThreader | | LSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYS--TTETMPSRVVCMIEWP------EHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPSAKRKVVKMMIVVVCTFAICWLPFHIFFLLLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAG |
9 | 4ww3A | 0.16 | 0.14 | 4.71 | 1.72 | CNFpred | | --------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE----GVLCNCSFDYISR-----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAA-RLAKISIVIVSQFLLSWSPYAVVALLAQFGPVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
10 | 3capA | 0.14 | 0.13 | 4.59 | 1.33 | DEthreader | | EGPN--SPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIP----EGMQCSCGDYY--TP--HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAQSTQKAEKEVTRMVIIMVIAFLICLPYAGVAFYIFHSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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