Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCHSHCCCCCCCCCCCCCSSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCSCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHSSSSSCCCCCCCCCCCCSSSHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCC MCPLTLHVTGLMNVSEPNSSFAFVNEFILQGFSCEWTIQIFLFSLFTTIYALTITGNGAIAFVLWCDRRLHTPMYMFLGNFSFLEIWYVSSTVPKMLVNFLSEKKNISFAGCFLQFYFFFSLGTSECLLLTVMAFDQYLAICRPLLYPNIMTGHLYAKLVILCWVCGFLWFLIPIVLISQKPFCGPNIIDHVVCDPGPLFALDCVSAPRIQLFCYTLSSLVIFGNFLFIIGSYTLVLKAVLGMPSSTGRHKAFSTCGSHLAVVSLCYSPLMVMYVSPGLGHSTGMQKIETLFYAMVTPLFNPLIYSLQNKEIKAALRKVLGSSNII |
1 | 2ks9A | 0.17 | 0.15 | 4.96 | 1.33 | DEthreader | | -----------------------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP-L-QPRLSATATKVVICVIWVLALLLAFPQGYYST-T-ET---MPSRVVCMIE--WPEHPNKI-YEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWSEDRVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYNPLFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCPFIR |
2 | 1gzmA | 0.14 | 0.14 | 4.69 | 2.12 | SPARKS-K | | --MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLV---------GWSRYIPEGMQCSCGIDYYTPHEETESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKND |
3 | 3dqbA | 0.15 | 0.14 | 4.84 | 0.61 | MapAlign | | -----GTEGPNFYVPFSNKTGVVRSPFEAPQYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRY---IPE---GMQCSCGI--DYYTPHEET-NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKSATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
4 | 3dqbA | 0.15 | 0.14 | 4.86 | 0.36 | CEthreader | | --MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCGI---DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
5 | 1f88A | 0.16 | 0.16 | 5.19 | 1.44 | MUSTER | | GTEGPNFYVPFSNKTGVVRSPFEAPQYYL----AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCGIDYY---TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYATHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP |
6 | 6kp6A | 0.17 | 0.14 | 4.66 | 1.32 | HHsearch | | -----------------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKR--TVPDNQCFAQFL---------SNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ--- |
7 | 3emlA1 | 0.17 | 0.15 | 4.82 | 2.22 | FFAS-3D | | --------------------------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPM---------NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL- |
8 | 2ks9A | 0.16 | 0.15 | 5.08 | 0.95 | EigenThreader | | --------DNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAF----PQGYYSTTETMPSRVVCMIEW----PEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGIT---LWASSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI |
9 | 4ww3A | 0.19 | 0.16 | 5.17 | 1.77 | CNFpred | | ------------------------------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEG----VLCNCSFDYISR-----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEK-NAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC |
10 | 2ziyA | 0.16 | 0.14 | 4.82 | 1.33 | DEthreader | | ---DL-RDNET-WY--------NPSIIVWRFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIRPMAASK-KMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAY-TL---EGVLCNCSFD--YISR---DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEMQNAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFLEVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWFDDT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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