Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCSCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCCCCSSSHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHSSC MGHQNHTFSSDFILLGLFSSSPTSVVFFLVLFVIFIMSVTENTLMILLIRSDSRLHTPMYFLLSHLSLMDILHVSNIVPKMVTNFLSGSRTISFAGCGFQVFLSLTLLGGECLLLAAMSCDRYVAICHPLRYPILMKEYASALMAGGSWLIGVFNSTVHTAYALQFPFCGSRAIDHFFCEVPAMLKLSCADTTRYERGVCVSAVIFLLIPFSLISASYGQIILTVLQMKSSEARKKSFSTCSFHMIVVTMYYGPFIFTYMRPKSYHTPGQDKFLAIFYTILTPTLNPFIYSFRNKDVLAVMKNMLKSNFLHKKMNRKIPECVFCLFLC |
1 | 2ks9A | 0.15 | 0.14 | 4.59 | 1.33 | DEthreader | | V-------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QPRLSATATKVVICVIWVLALLLAFPQGYYST-T-E-----PSRVVCMIEW--PEH-PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWSEDRYSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYNLYFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF------------------ |
2 | 4n6hA2 | 0.16 | 0.14 | 4.59 | 2.05 | SPARKS-K | | -----------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG---------AVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------ |
3 | 3dqbA | 0.16 | 0.15 | 4.95 | 0.66 | MapAlign | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRY------IPEGMQCSCGIDYYTPHEE---TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKAATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------------ |
4 | 3dqbA | 0.17 | 0.15 | 5.04 | 0.38 | CEthreader | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLV----GWSRYIPEGMQCSC---GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAATQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------------ |
5 | 1f88A | 0.16 | 0.16 | 5.16 | 1.42 | MUSTER | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCGIDYY---TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYA-HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQV----- |
6 | 6kp6A | 0.16 | 0.13 | 4.38 | 1.31 | HHsearch | | --------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKR--TVPDNQCFAQF---------LSNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ-------------------- |
7 | 3emlA1 | 0.19 | 0.16 | 5.21 | 2.10 | FFAS-3D | | -----------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPM---------NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ---------------- |
8 | 2ks9A | 0.14 | 0.13 | 4.59 | 0.98 | EigenThreader | | SDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGY----YSTTETMPSRVVCMIEW----PEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQ |
9 | 1gzmA | 0.18 | 0.15 | 4.95 | 1.72 | CNFpred | | ----------------------QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEG----MQCSCGIDYYTPHE----TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKE-TTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT-DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG-------------------- |
10 | 6me6A | 0.18 | 0.16 | 5.18 | 1.33 | DEthreader | | ETKMRALLKTNAQ-GDGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLE-Y----DPRIYSCTFIQ--T-----A--STQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLRMKKVCLKPDSFLTMFVVFVIFAICFAPLNCIGLAVPMAPIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRILLALWN------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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