Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCSCSSSSSSCCCCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCSCCCHHHHHHHHCC MPVGKLVFNQSEPTEFVFRAFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTHSTLRTPMYFFLSNLSFLELCYTTVVVPLMLSNILGAQKPISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRELCTQMLGGALGLALFPSLQLTALIFTLPFCGHHQEINHFLCDVPPVLRLACA |
1 | 4zwjA | 0.19 | 0.18 | 5.81 | 1.33 | DEthreader | | GTWDAM-EGPNFSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRY-I---P-EGLQCSCGIDY-YTLKPE |
2 | 4zwjA2 | 0.19 | 0.18 | 5.95 | 1.74 | SPARKS-K | | GPNFYPFSNATGVVRSPFEYPQYYPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPL-----AGWSRYIPEGLQCSCGIDYYTLKPEV |
3 | 3dqbA | 0.19 | 0.18 | 5.80 | 0.66 | MapAlign | | FYVPFSNKTGVVRSPFEAPQYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRY-------IPEGMQCSCGIGPIFMTIPA |
4 | 3capA | 0.17 | 0.16 | 5.40 | 0.46 | CEthreader | | YVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLV-----GWSRYIPEGMQCSCGIDYYTPHEET |
5 | 4zwjA2 | 0.18 | 0.18 | 5.84 | 1.59 | MUSTER | | PNFYVPFSNATGVSPFEYPQYYAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLNESFVIYMF |
6 | 6kp6A | 0.18 | 0.15 | 5.02 | 1.30 | HHsearch | | ------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKR---TVPDNQCFAQPAVTFGTA |
7 | 5x33A | 0.19 | 0.16 | 5.30 | 1.84 | FFAS-3D | | ----------------------SNTFIPLLAMILLSVSMVVGLPGNTFVVWSILKRMRKRSVTALMVLNLALADLAV-LLTAPFFLHFLTWGTWSFGLAGCRLCHYICGVSMYASVLLITAMSLDRSLAVASPFLSQKVRTKTAARWLLVGIWGASFLLATPVLAFRKVVKLTNETDLCLAVYPSVVPFLIVV-- |
8 | 3capA | 0.16 | 0.16 | 5.26 | 0.82 | EigenThreader | | MNGFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPLV----GWSR--YIPEGMQCSETNNESFVIYM |
9 | 1gzmA | 0.19 | 0.16 | 5.13 | 1.23 | CNFpred | | --------------------------QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE-----GMQCSCGIDYYTPHEET |
10 | 2ks9A | 0.18 | 0.16 | 5.18 | 1.33 | DEthreader | | ------------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP-L-QPRLSATATKVVICVIWVLALLLAFPQGYYST-T-E-----MPSRVVCMIEW-PEHPNK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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