Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CHHHHHHHHHCCCCCCCCHHHCCCCCSSSSSCCCSSSSSSCCCCCSSSSSSSSSSSSSCCCCCCSSSSSSSSSSSSSSSSSSCCCCCCSSSSSCCCSSSSSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC HILEKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMGGNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAVLVYVNRKWTNL |
1 | 1bp1A | 0.18 | 0.17 | 5.64 | 1.33 | DEthreader | | --PDYSD--SFKI--LGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISANIKISGKWKASGNFDLSIEMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSKLQPYFQTP |
2 | 2obdA1 | 0.12 | 0.12 | 4.22 | 1.91 | SPARKS-K | | ---SYPDITGEKAMMLLQVKYGLHNIQISHLSIASSQVELVEAKSDVSIQDVSVVFKGTLKYGQSIDFEIDSAIDLQINTQLTADSGRVRTDAPDCYLSFHKLLLHLEPGWIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTR |
3 | 1bp1A | 0.18 | 0.18 | 5.84 | 1.21 | MapAlign | | -TAALQKELSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISANIKISGKWKASGNFDLSIGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHIKSKVLIQLFHKKIESALRNKMNSQVCEKVTNSVSKLQPYFQ-- |
4 | 2obdA1 | 0.14 | 0.13 | 4.57 | 1.11 | CEthreader | | --SYPDITGEKAMMLLGQVKYGLHNIQISHLSIASSQVELVEAKSDVSIQDVSVVFKGTLKYSIDFEIDSAIDLQINTQLTAD--SGRVRTDAPDCYLSFHKLLLHLQGERIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTR |
5 | 3zpmA | 0.16 | 0.16 | 5.31 | 1.26 | MUSTER | | GLLNTILDQVTGLILVGPLLGPSAEIKLQDTRLLQLSLEFSPSKGIDIWIPLELSVYLKLLILEPLTLYVRTDIRVQLRLESD-EDGKYRLAFGHCSLLPRAIELQSGNPAVLGTIENALGNFITEDLGAGLCPTLNSLVSNLDLQLVNN |
6 | 4m4dA | 0.20 | 0.20 | 6.38 | 3.03 | HHsearch | | VALQRELYKI--TLPVGRGQYEFHSLEIQNCELRGSSLKLLPGQGLSLAISSSIGVRGKWKLHGSFDLDVGVTISVDLLLGMD-PSGRPTVSASGCSSRICDLDVHIGNGWLLNLFHNQIESKLQKVLENKVCEMIQKSVSDLQPYLQTL |
7 | 2obdA1 | 0.12 | 0.11 | 3.97 | 1.51 | FFAS-3D | | -------------MLLGQVKYGLHNIQISHLSIASSQVELVEAKSIDVSIQVSVVFKGTLKYDQSIDFEIDSAIDLQINTQLTADSGRVRTDAPDCYLSFHKLLLHLQGGWIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTR |
8 | 4kghB | 0.16 | 0.15 | 5.09 | 1.12 | EigenThreader | | PLLDILLGKVTSVIPGNNV---IDIKVTDPQLLELGLVQSPDGHRLYVTIPLGIKLQVNTPLVGLLRLAVKLDITAEILAV----RDKIHLVLGDCTHSPGISLLDGLGPLPIQGLLDSLTGILNKVVQGNVCPLVNEVLRDIVNMLIHG |
9 | 2obdA | 0.13 | 0.13 | 4.40 | 2.14 | CNFpred | | KVIQTAFQRASYP--LGQVKYGLHNIQISHLSIASSQVELVEAKSIDVSIQVSVVFKGTLKYGQSIDFEIDSAIDLQINTQLTADSGRVRTDAPDCYLSFHKLLLHL-PGWIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTR |
10 | 1bp1A1 | 0.18 | 0.17 | 5.64 | 1.33 | DEthreader | | --PDYSD--SFKI--LGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISANIKISGKWKASGNFDLSIEMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSKLQPYFQTP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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