Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCSSSSCCCCCCSSSSSSSSCCCCCCCCCSSSSSSSSSCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEG |
1 | 6nzdH | 0.88 | 0.57 | 15.91 | 0.83 | DEthreader | | -NAIVALCHFCELHGPRTLFCTEV-------------------------------------------------------------------------------IKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQ--FGCPQRA-QRMNTAF------AARSLTSLTSD-DNLWACLHTSFAWLLKACGSR-------- |
2 | 6nzdH1 | 0.99 | 0.68 | 18.97 | 2.67 | SPARKS-K | | -NAIVALCHFCELHGPRTLFCTE-------------------------------------------------------------------------------VIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSR-------- |
3 | 6nzdH | 0.80 | 0.54 | 15.15 | 1.55 | MapAlign | | -NAIVALCHFCELHGPRTLFCTE--------------------------------------------------------------------------------VKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDD-NLWACLHTSFAWLLKACGSR-------- |
4 | 6nzdH1 | 1.00 | 0.68 | 19.07 | 1.69 | CEthreader | | -NAIVALCHFCELHGPRTLFCTEV-------------------------------------------------------------------------------IKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSR-------- |
5 | 6nzdH1 | 0.99 | 0.68 | 18.97 | 1.96 | MUSTER | | -NAIVALCHFCELHGPRTLFCTEVI-------------------------------------------------------------------------------KYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSR-------- |
6 | 6nzdH | 0.97 | 0.69 | 19.39 | 7.73 | HHsearch | | -NAIVALCHFCELHGPRTLFCTEV-------------------------------------------------------------------------------IKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSRLPVFKLMG |
7 | 6nzdH1 | 0.99 | 0.68 | 18.97 | 2.54 | FFAS-3D | | -NAIVALCHFCELHGPRTLFCTE-------------------------------------------------------------------------------VIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSR-------- |
8 | 6nzdH1 | 0.85 | 0.54 | 15.21 | 1.15 | EigenThreader | | -NAIVALCHFCELHGPRTLFCTE----------------------------------------------------------------------VIK---------YVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFE-----------AEQFGTPFLHQRNGNAARSLTSLTS-DDNLWACLHTSFAWLLKACGSR-------- |
9 | 1yaaA | 0.10 | 0.06 | 2.26 | 0.56 | CNFpred | | GSIFVLHSCAHN-------PTGLDPTSEQWVQI------------------------------------------------VDAIASK----NHIALFDT----AYQGFATGDLDKDAYAVRLGVEKLS-------TVSPVFVCQ-----SFAKNAGMYG------ERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAK-----------------------------IVAKLLETTEQWHKDMVTMSSRITKMRHALRDHLVKL |
10 | 6nzdH1 | 0.88 | 0.56 | 15.80 | 0.83 | DEthreader | | -NAIVALCHFCELHGPRTLFCTEV-------------------------------------------------------------------------------IKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQ--FGCPQRA-QRMNTAF------ARSLTSLT-SD-DNLWACLHTSFAWLLKACGSR-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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