>Q8NFD2 (104 residues) MAADPTELRLGSLPVFTRDDFEGDWRLVASGGFSQVFQARHRRWRTEYAIKCAPCLPPDA ASSDVNYLIEEAAKMKKIKFQHIVSIYGVCKQPLGIVMEFMANG |
Sequence |
20 40 60 80 100 | | | | | MAADPTELRLGSLPVFTRDDFEGDWRLVASGGFSQVFQARHRRWRTEYAIKCAPCLPPDAASSDVNYLIEEAAKMKKIKFQHIVSIYGVCKQPLGIVMEFMANG |
Prediction | CCCCCCCCCCCCCCCCCHHHHCHHHSSSSSCCCSSSSSSSSCCCCSSSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSCSSSSSSCCCCSSSSSCCCCC |
Confidence | 99884221336886336456103212442178819999997789928999983267876225899999999999985899755258888869748987648899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MAADPTELRLGSLPVFTRDDFEGDWRLVASGGFSQVFQARHRRWRTEYAIKCAPCLPPDAASSDVNYLIEEAAKMKKIKFQHIVSIYGVCKQPLGIVMEFMANG |
Prediction | 85555464625515404475045425404544444303030575724000220444477545542530250052055161420020101045220000022758 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCHHHHCHHHSSSSSCCCSSSSSSSSCCCCSSSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSCSSSSSSCCCCSSSSSCCCCC MAADPTELRLGSLPVFTRDDFEGDWRLVASGGFSQVFQARHRRWRTEYAIKCAPCLPPDAASSDVNYLIEEAAKMKKIKFQHIVSIYGVCKQPLGIVMEFMANG | |||||||||||||||||||
1 | 4c8bA | 0.32 | 0.28 | 8.40 | 1.33 | DEthreader | ----------SALPTIPYHKLA-DLRYLSRGASGTVSSARHADWRVQVAVKHLHITP--LLDSERKDVLREAEILHKARFSYILPILGICNEFLGIVTEYMPLF | |||||||||||||
2 | 2x4fA1 | 0.14 | 0.13 | 4.59 | 1.83 | SPARKS-K | IPAPPAPFDHRIVT-AKQGAVNSFYTVSKTEILGQVHKCEETATGLKLAAKIIKTR----GMKDKEEVKNEISVMNQLDHANLIQLYDAFESDIVLVMEYVDGG | |||||||||||||
3 | 5ek7A | 0.19 | 0.16 | 5.28 | 0.45 | MapAlign | -------AVLKFTTEIHPSCV-TRQKVIGAGEFGEVYKGMLKTKEVPVAIKTLKA---GYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKPMMIITEYM--- | |||||||||||||
4 | 5ek7A1 | 0.21 | 0.20 | 6.41 | 0.26 | CEthreader | TYEDPNQAVLKFTTEIHPSCV-TRQKVIGAGEFGEVYKGMLKTKEVPVAIKTLKAG---YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKPMMIITEYMENG | |||||||||||||
5 | 2j0kB2 | 0.21 | 0.20 | 6.40 | 1.79 | MUSTER | DEEDTYTMPSTRDYEIQRERIEL-GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEPVWIIMEL---- | |||||||||||||
6 | 6ygnA | 0.12 | 0.12 | 4.07 | 0.66 | HHsearch | EVDETREVSMTKASHSSTKELYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFEEELVMIFEFISGL | |||||||||||||
7 | 4c8bA1 | 0.30 | 0.25 | 7.60 | 1.50 | FFAS-3D | ----------SALPTIPYHKLAD-LRYLSRGASGTVSSARHADWRVQVAVKHLH-IHTPLLDSERKDVLREAEILHKARFSYILPILGICNEFLGIVTEY---- | |||||||||||||
8 | 2ozoA2 | 0.26 | 0.24 | 7.42 | 0.60 | EigenThreader | MDTSVFESLKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRKKQIDVAIKVLKQGTEKAD---TEEMMREAQIMHQLDNPYIVRLIGVCQAALMLVMEM---- | |||||||||||||
9 | 1koaA | 0.20 | 0.15 | 4.93 | 1.59 | CNFpred | -------------------DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDEMVMIYEFMSGG | |||||||||||||
10 | 6cpyA | 0.12 | 0.11 | 3.76 | 1.33 | DEthreader | --------VT-GVPSLKRSELTAEFNIIGSTSTCMLYKGTLS-SGVEIAVASSLVSAKDWSKENESQYRKKITNLSKVSHKNFMNLLGYCEETRVMVFEYAPLF | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |