Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCHHHCCHHHHHHCCSCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHCCCCCCC WCDYCKKKVWTKAASQCMFCAYVCHKKCQEKCLAETSVCGDSVFIAVKEIGRDLYRGLPTEERIQKLEFMLDKLQNEIDQELEHNNSLVREEKETTDTRKKSLLSAALAKSGERLQALTLLMIHYRAGIEDIETLESLSLDQHSKKISKYTDDTEEDLDNEISQLIDSQPFSSISDDLFGPSESV |
1 | 6r3qA | 0.08 | 0.07 | 2.81 | 1.00 | DEthreader | | LSI-------VMVAP-A--LC-FLVVCVGLLLVFLTMCIEVLFLLYTVHFMSQVRRSFASATFSSLLDVSHGVYCRSSLATVVGAGPLLLLLYVS----ASLIGQEVILVFFLLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNIPDIEKIKAAGFNHVSEEYFDYRGT- |
2 | 3cxlA | 0.18 | 0.17 | 5.64 | 1.55 | HHsearch | | WCEYCANFMWGAQGVKCADCGLNVHKQCSKMVP--NDCKPDMCIREIESRGEGLYRVSGFSDLIEDVKMAFDRDGEKADIITGALKLYFRDLPIPMDPDEQLTLHEALKLLPAHCETLRYLMAHLKRVTLHEKENLMNAENLG--IVFGPTLMRSPEL-DAMAALNDIRYQRLVVELLIKNEDIL |
3 | 6tpiA1 | 0.07 | 0.05 | 2.25 | 0.67 | CEthreader | | --------------LKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSI------------------------ |
4 | 3tnfB | 0.09 | 0.09 | 3.26 | 0.67 | EigenThreader | | ----LDEYEQAIKRAQENIKK--GEELEKKLRQGKDLEDKYKTYEENLEGFEKLLTDSEEDLATIKMEALIHKLSLEMEKQLETINNLIMS-----TD---PKENEEATKLLHKHNGLNLKLANLQDMLAVHREKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERVEETKQQLEDNGK |
5 | 5ue8A1 | 0.19 | 0.10 | 3.31 | 0.78 | FFAS-3D | | YCYECEGLLWGRQGMRCTECGVKCHEKCQDLL---NADCLQRAAEKSSKH--------GAEDRTQNIIMVLKDRMKIRERNKPEIFELIQEVFAVTKSAHTQQMKAVKQSV-------------------------------------------------------------------------- |
6 | 6w2vA | 0.10 | 0.10 | 3.58 | 0.82 | SPARKS-K | | --ATDKEEVIEIVKELAELAKLVVVRALTEVAKTSTD---TELIREIIKVLLELASKLRDPQAVLEALQAVAELARELAEKTEAVKKAADLLKRHPGSEAAQAALELAKAAAEAVLIACLLALDAKKCIKAASEAAEEASKAAEEAQRHPD---SQKARDEIKEASQKEVKERCERAQEHPNAGW |
7 | 7jh5A | 0.16 | 0.11 | 3.60 | 0.60 | CNFpred | | ------ARKLLEASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVELDPKRIRDE--IKEVKDKSKEIIRRAEKEIDDAAKESEKILEEAREAISG--GSELAKLLLKAIAETQDLNLRAAAFLEAAAKLQELN------------------------------------------------- |
8 | 5xbjA | 0.07 | 0.05 | 2.21 | 1.00 | DEthreader | | -D-------------EYSYYKL----------A-----STQLEYTKYMASTLQEIARTTLDKIQKKVNDDIKNTVDEINRIGEEIATINKQIYGALPTEHANELRDRRDELELTLSKLVGQLGAQLDLRGIIQGYMDSLDTFAKTMINETNNLYASSAIVIYDKGDKK----------------- |
9 | 4gl2A | 0.09 | 0.09 | 3.34 | 0.95 | MapAlign | | IVLVNKVLLVEQLLSSFPEVVKISTAQILENSLLGVQLIMRHYLMQKLKNNRLGVGGATQAKAEEHILKKLLEIMTRIQFGQPYEQWAIQMEKKAAKEGERVCAEHLRKYNEALQINLMTLFFENNFREKMMYKAIHCVLQMQSIMEKKMKTKPSLITFLCKNCSVLACSGEDIHVIEKMHHVNM |
10 | 4uosA | 0.19 | 0.17 | 5.58 | 0.67 | MUSTER | | -----GKKMLEKMIEEI--------KKMLEKAIKK---VKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKEEVKKMLEKM-EIKKMLEKAIKKVKEMLEKMIKEIKKMLENDSEKILKKAKEMAEKILKMVIELAELKKAKEMAEKILKKVKEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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