Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCSSSSSSCCCCCSSSCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCSSSHHHHHHHHCCCCCCCCSHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHCCCCCCSCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCHHHCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCSSSSCCCCCCCCCCCSSSSSCCCCCCCCSSSSCCCCCCCCHHHHHHHHHHCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC MLRRGYKASERRRHLSERLSWHQDQALSSSIYLLREMGPTGFLLREEEPEYMDFRVFLGNPHVCNCSTFPKGGELCKHICWVLLKKFKLPRNHESALQLGLGEREISDLLRGIHRVQTPQPGTNDENEHVEEDGYIKQKEIDSEDICSICQELLLEKKLPVTFCRFGCGNSIHIKCMKILANYQSTSNTSMLKCPLCRKEFAPLKLILEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSCCHLSHTFTFREKRNQKWRSLEKRADEVVKYIDTKNEIEEKMSHFQEKQGQVYTPKHIVRSLPLQLITKNSKLLAPGYQCLLCLKAFHLGQHTRLLPCTHKFHRKCIDNWLFHKCNSCPIDGQVIYNPLTWKNSAVNGQAHQSVSNRDIIHLSKQKEPDLFIPGTGLVLKQNRLGILPSIPQCNFDELNTPQSPKDAYENTTIDNLCSIKLDNSNSKKLTYDYKISQHFPRYLQDLPTVSFGKIPSQTLLPPIVHKNIVCPTAMESPCISGKFHTSLSRMTKGCKCNNHNLKKTPATKIREDNKRSTLLPEDFNLIVNWSTAKLSLSKRYSNCMGEITRKCSHLSRQPVSHSVNTKSTELSLIIEGVQL |
1 | 2pffB | 0.05 | 0.05 | 2.19 | 2.00 | MapAlign | | ISLVNGAKNLVVSGPPQSLYGLNLTLRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGENYSAMIFETIVDGKLKTEKISYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVM |
2 | 2dipA | 0.87 | 0.13 | 3.74 | 1.60 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGLEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYCHLSHTFTFREKRNQKWRSLEKRADEVSPSSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
3 | 4xi6A | 0.14 | 0.08 | 2.59 | 0.89 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------SRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGA-YDLRILDSAPTGIK----------------HDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHLRHRFYRITTPGSERVLLESRRKSTARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDPVLGLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKASQFQVGQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKV------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5l4kN | 0.06 | 0.05 | 2.31 | 0.90 | EigenThreader | | --MITSAAGIISLLDEPQLKEFALHKL-------------------NAVVNDFV-----DKIEVLYEDEGFRSRQFAALVASKVFYHLGAFESEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESALSSVIQNLRTVGTPTLKMIK---------------ILSG---EMAIELHLQFLIRN-----NNTDLM--ILKNTKDAVRNSVCHTATVIANSFMHCGTTSDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYL---PKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKT--NLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQET----QHEKILRGLAVGIALVMYGRMEEADALRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESQCPSVVSLLSESYNGAAMALGICCA---GTGNKEAINLLEPMTNGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK |
5 | 2l0bA | 0.27 | 0.03 | 1.07 | 0.79 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWL-QKSGTCPVCRCMFPPPL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 4btgA | 0.10 | 0.09 | 3.28 | 0.95 | SPARKS-K | | -------------GFNLKVKDLNGSARGLT---------QAFAIGELKNQPLQFTRTFSASMTELLWEVGKGNIDPVMYARLFFQYAQAGGALSV-------DELVNQFTEYHQSTCNPETGSSNRAIKADAVGKVPPTAI---------LEQLRTAPSEHELF-----HHITTDFVCHVLSPLGILPDAAYVYRVGRATYPNFYALVDCVRASDLR--RMLTALSSVDSKMLQATFKAKGALAPA---------LISQHLANAAT----TAFERSRGNFDWSPSPKELDPSARLRNTNDQLRSNLAMVKQRGDEELSSTIIPWFIEAMSQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPSNQRFLEPGISDRMSATLA--PIGNTFAVSAFVKNRTAVYE----AVSQRGTV---NSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARYAVAHNPEVVVSEHQGVAAEQLVWNVRTELRIPVGYNAIEGGAYNKPIQPS--EVLQAKVLIWPWHEASTEF--AYEDAYSVTIRNKRTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSDRTAARRTSRDDAEKLRRMQNMIGTTGIGASSSDLHVRIWAGLAVLQM |
7 | 5e84A | 0.14 | 0.04 | 1.24 | 0.76 | CNFpred | | ----------------AAIAYGLDKRGEKNILVFDLGGAFDVSLLTID--NGVFEVVATNGDTHLGG-----EDFDQRVMEHFIKLYKDVRKDNRAVQ--KLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRA-----KFEELNMDLFR---------------STMKPVQKVLEDSDLK---SDIDEIVLVGGSTRIPKIQQLVKEFF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 4f91B | 0.05 | 0.03 | 1.58 | 0.67 | DEthreader | | -MRSLVQEVCTPLDEIIGLSATLPNY--FDNS------VPLEQTYVGITERIMIVKIEHNQV--FA---------LPAHTVII--TQ-TE-GALDILQMLGRAG-GEGILITSH----REEEKLELQKLLE--PIPVVLQITAGLCKMIDKRMPLRQFRKLPEEVVK-IEK-----------------------------------RMPKMGKTIHKYVHLFKLEPDFQHSEAFYFLLKAKYAQDEHLITFFVIRVVS------------------------------------------------------Y-PPT------------ELLD-LQPLPVSALYQFPFFNPIQTQVFNTVYN------TGSGKTIC-AEFAILRLEGRCVY--I-----------T-PMEALAELLTGTDKLKGNIIISTPKWDILS-EN----------HEGLSSLYYNGKIEISNAAEYE-LRLAQKVPLLLQAHLSRTELSKAIRLQACVDLSALAAMAQMTQAMKQLPHFTHIRCTVESVF-------ALLQLT--Q--------------------------------YPNIELS-LVQLERE------WVVIGDAKSNSL-----------NYTLYM |
9 | 1vt4I3 | 0.05 | 0.04 | 1.69 | 1.87 | MapAlign | | YTDLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3chnS | 0.09 | 0.08 | 2.91 | 0.72 | MUSTER | | ------------------------------------KSPI------FGPEEVN--SVEGNSVS-TCYYPPTSVNRHTRKYW-----CRQGARGGC-----------ITLISSEGYVSSKYAGRANLTNFPENGTFVVNAQLSQDDKCDV---GLLNDTKVYT---VDLGRTVTINCP------KTENAQKRKS-------YKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIAGQ-YLCQAGDD--------SNSNKKNADLQVLKPEPELVYEDLRGSVTHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA--RYLCHSD----------GQLQEGSPIQAWQLFNEESTIPRSPTVVKGVAGSSVAVLPYNRKESKSIKYWCL----EGAQNGRCPLLVDSE-GWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDALTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCK----NNTGCQALPSQDEGPSKAFVNCDENSRLVS-----LTLNLVTRADEGW-GVKQGHFYGETAAVYVAERKAAGSRDVSAAPDEKVLDSREI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|