Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCSSSCCCCCCCCCHHHHHHHHHHHCCCCSSSSCCCCCCCHHHHHHHHCCCCCCSSSCCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCHHHHHHHHHHCCCCCSSSCCCCCCCCHHHHHHHHHHCCCCCCCSSSCCCCCCCCHHHHHHHHHHCCCCCSSSCCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCCHHHHHHHCCCCCCSSSSCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCCHHHHHHHHCCCCC ESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQL |
1 | 6o60C | 0.27 | 0.25 | 7.64 | 1.33 | DEthreader | | ------------------G-L-N--LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDL-FNFQ--TGRVVENISKRCGGFLRKLSLRGCGVGDSSLKTFANCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVR--GCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCRLQLEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSHCPKL |
2 | 6o60C | 0.28 | 0.26 | 7.83 | 1.55 | SPARKS-K | | -------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWRKLSLRGC-IGVGDSSLKTFAQNCRN-IEHLNLNGCTITDSTCYSLSRFSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYC--HELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSERL |
3 | 6o60C | 0.29 | 0.26 | 8.07 | 0.74 | MapAlign | | --------------------LINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNLRKLSLRGCIG-VGDSSLKTFAQNC-RNIEHLNLNGCTITDSTCYSLSRCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQ--NYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARCELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSTCGRL |
4 | 6o60C | 0.28 | 0.26 | 7.83 | 0.52 | CEthreader | | -------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGGFLRKLSLRGCIG-VGDSSLKTFAQNC-RNIEHLNLNGCTITDSTCYSLSRCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQ--NYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCG |
5 | 6o60C | 0.27 | 0.25 | 7.74 | 1.31 | MUSTER | | -------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTG---RVVENISKRCGGFLRKLSLRGCIGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG--CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHPKL |
6 | 6o60C | 0.29 | 0.27 | 8.16 | 1.50 | HHsearch | | -------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQT---GRVVENISKRCGRNIEHLNLNGCTITDSTCYSLRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQ--NYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSRLRVL |
7 | 6o60C | 0.24 | 0.22 | 6.80 | 2.39 | FFAS-3D | | ----------------------NKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRI---DLFNFQTGRVVENISKRCGGFLRKLSLRGCIVGDSSLKTFQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALG--LNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLGHERLRVLELDNCLLITDVALEHL-ENCRGLERLELYDCQQVTRAGIKRMRALPHV |
8 | 6o60C | 0.27 | 0.25 | 7.74 | 1.05 | EigenThreader | | -------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLF---NFQTGRVVENISKRCGGFLRKLSLRGCVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVR--GCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPK |
9 | 6o60C | 0.28 | 0.25 | 7.73 | 3.22 | CNFpred | | ----------------------NKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQT---GRVVENISKRCGGFLRKLSLRGCIVGDSSLKTFANCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVR--GCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSHCPKL |
10 | 6w66B | 0.20 | 0.18 | 5.69 | 1.33 | DEthreader | | -----------------------NQLPPSILLIFSNLSLDERCLSSL-CKYWRDLCLDFQF-WKQLDLSSRQQVT-DELLEKIASRSQN-IIEINISDCRMSDNGVCVLAKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAK--GCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLT-KLRNLSSLDLRHITELDNETVMEIVRCKLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCK-ITDYALIAIGSMTET |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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