>Q8NEB9 (153 residues) DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELI PLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQII SLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF |
Sequence |
20 40 60 80 100 120 140 | | | | | | | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF |
Prediction | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCSSSSSSSCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSSSSSCCCCCSSSSC |
Confidence | 940799999999999999999999999995255545789999997421443045678975689998268998714627882301597699998589958999996278722899999999999999997299807898789981698236619 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF |
Prediction | 875254235204403500530250054047456646513521451254364361563741301230313044032640421403421220203044433021013324202202102200410230055371402031020000267140104 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCSSSSSSSCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSSSSSCCCCCSSSSC DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||||||||
1 | 2x6fA | 0.58 | 0.58 | 16.53 | 1.50 | DEthreader | NFNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFNFTNFEPIPFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPYKVLATSSKHGFLQY | |||||||||||||
2 | 3ihyC | 1.00 | 1.00 | 28.00 | 3.00 | SPARKS-K | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
3 | 3ihyC | 1.00 | 0.98 | 27.45 | 1.34 | MapAlign | ---VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
4 | 3ihyC | 1.00 | 1.00 | 28.00 | 1.20 | CEthreader | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
5 | 3ihyC | 1.00 | 1.00 | 28.00 | 2.36 | MUSTER | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
6 | 6nctA | 0.27 | 0.26 | 8.04 | 2.68 | HHsearch | RACGMYL-KHLNRQVEAMEKLINLTDILKQEKKTQKVQMKFLVEQMRRPDFMD--ALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEV | |||||||||||||
7 | 2y3aA4 | 0.31 | 0.29 | 8.70 | 1.93 | FFAS-3D | -------MKVLSKQVEALNKLKTLNSLIKLNKLSRAKGKEAMHTCLKQSAYREA--LSDLQSPLNPCVILSELYVEKCKYMDSKMKPLWLVYSSRAFGSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIE- | |||||||||||||
8 | 2x6fA | 0.55 | 0.53 | 15.26 | 1.33 | EigenThreader | NFNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFEPEIYITK-----IVPMRTSLFKSALMPAKLTFVTIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPYKVLATSSKHGFLQY | |||||||||||||
9 | 4ph4B | 1.00 | 1.00 | 28.00 | 2.10 | CNFpred | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
10 | 3ihyC | 1.00 | 1.00 | 28.00 | 1.50 | DEthreader | DKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQF | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |