>Q8NCL8 (245 residues) MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLGNTSECFQNFSQSHKCI LMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIMVLLIRAQTLYKKFVKS TGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLTKPQDTKLHMALYVLQALT ATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRFYSRGLNSLESTLTFPAS TSTIF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLGNTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLTKPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRFYSRGLNSLESTLTFPASTSTIF |
Prediction | CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 98776776466401112344356778999999999997999961221124555544314764168865544455567531345656788999999999999999999999999998612257743368999999986576776666641342999999997044342204578999999887665555544343278899986765115677772011143111257898766666567666569 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLGNTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLTKPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRFYSRGLNSLESTLTFPASTSTIF |
Prediction | 75445534423132232102002000000133233211000011224522553434330010234341333313344333440233100011331332123321101010231034215332324454251143043301100100220031200200020144342320000033102223310330020001134204403552354674424222244412455244465444344544426 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLGNTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLTKPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRFYSRGLNSLESTLTFPASTSTIF | |||||||||||||||||||
1 | 4zwjA | 0.12 | 0.10 | 3.45 | 1.00 | DEthreader | LLAERYVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLGWSRYIP-------QCSCGIDYYTL----------K-PEV-NNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES-ATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQGSCFG-PIFMTIPAFFAKSAAIYNPVIYMMNKQFRNC-------------SRDK-------KRFEVKAFDPEEDK------ | |||||||||||||
2 | 4n6hA | 0.16 | 0.13 | 4.20 | 1.50 | SPARKS-K | DRYIAVCHPVKA-LDFRTPAKAKLINICIWVLASGVGVPIMVMA----VTRPRDGAVVCMLQFPSPS-------------WYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV--RLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--------------------------------- | |||||||||||||
3 | 3dqbA | 0.12 | 0.10 | 3.43 | 0.58 | MapAlign | FVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVCAAPPLGWSRYIPE--GMQCSCGIDYYTPH---------------EETNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQ--GSDFPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------------------------- | |||||||||||||
4 | 4grvA1 | 0.13 | 0.10 | 3.38 | 0.43 | CEthreader | ARYLAICHPFKAKT-LMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVD--------------TATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMSGSV--------QALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV------------------------------------------- | |||||||||||||
5 | 2ks9A | 0.16 | 0.15 | 5.00 | 0.98 | MUSTER | DRYMAIIH---PLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRV----VCMIEWPEHPN------------KIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVV | |||||||||||||
6 | 6kp6A | 0.10 | 0.08 | 2.86 | 1.36 | HHsearch | DRYFCVTKPLTYPA-RRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGK-RTVPDNQCFAQFLSN------------------PAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGIDCSLSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCI--PDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ----------------------------------- | |||||||||||||
7 | 2ziyA | 0.12 | 0.11 | 3.78 | 1.83 | FFAS-3D | -RYNVIGRPM-AASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLC---NCSFDYISRD--------------STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEW-VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVCQFDDKETEDDKDAETEIPAGESSDAAPSADAA-- | |||||||||||||
8 | 4n6hA2 | 0.16 | 0.13 | 4.19 | 0.72 | EigenThreader | RYIAVCHPVKALDFRT-----PAKAKLINICIWVLASGVGVPIMVMAVTRPRG--AVVCMLQ-------------FPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV--RLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--------------------------------- | |||||||||||||
9 | 3zevA | 0.13 | 0.10 | 3.40 | 1.15 | CNFpred | ELYLAICHPFKAKTL-MSRSRTKKFISAIWLASALLAIPMLFTMGLQNL-GTHPGGLVCTPIVDT----------------ATLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ-----PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYIS-LFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVFLSTLA------------------------------------- | |||||||||||||
10 | 5wb1A | 0.07 | 0.06 | 2.47 | 1.00 | DEthreader | FITEIALRYAIYRPVKQACLFSIFWWIFAVIIAIPHFM-VV--TKKD-N-------QCMTDYD----------------YL-EV-SYPIILNVELMLGAFVIPLSVIYCYYRISRIVAV--SQ-SRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQE-CPRG---YRQKQRELVARYIYLYYCNAEE--VE------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |