Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPNEIEPPPPEMPPWQKRQDGPQQQTGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGGRGGRGGRGGRAGQGGGWGGRGSQNYHQGGQFEQHFQHGGYQYNHSGFGQGRHYTS |
1 | 1vt4I3 | 0.40 | 0.39 | 11.46 | 2.13 | SPARKS-K | | IFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGG |
2 | 2pffA1 | 0.43 | 0.38 | 11.25 | 1.24 | MUSTER | | -----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGG |
3 | 7a5oA | 0.08 | 0.08 | 3.05 | 0.54 | CEthreader | | PLAKCSCYGLYLEAGDVVRCVCRDGRLHCRALSCQTLAAGYYHVCPDGLMDDGRGGCVVEKECPCVHNNDLYSSGAKIKVDCNTCTCKRGRWVCTQAVCHGTCSIYGSGHYITFDGKYYDFDGHCSYVAVQDYCGLGSFSIITENVPCGTTGVTCSKAIKIFMGRTELKLEDKHRVVIQRDEGHHVAYTTREVGQYLVVESSTGIIVIWDK |
4 | 5zyqA | 0.06 | 0.06 | 2.51 | 0.52 | EigenThreader | | -----RGRDTDEDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLEAARIDGNLDYRDHEKDQMTCLDTLAYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELGVTIDLLDPADEKLLE |
5 | 6edoA | 0.42 | 0.39 | 11.42 | 0.91 | FFAS-3D | | -----------MGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
6 | 1vt4I | 0.40 | 0.39 | 11.46 | 1.99 | SPARKS-K | | IFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGG |
7 | 1s9rA | 0.03 | 0.02 | 1.43 | 0.67 | DEthreader | | -------EIGLESVLV-L--LEFEDSEVLSEEHKVVVRNFL-KAK--KT--SRELVEIMMAGDPMPNLYFTRDPHYMRQETLFSVFTWYYDPSLKLSIEDVGDLQTVTLLANINCEFKRIVDDNLEGLLQSIINKKPVLIPIAIEGTNYLAIVVI-GYSRNEPFHGN-------QL-SL-GMGN-RCMSMP-S------------------ |
8 | 5xgsA2 | 0.07 | 0.06 | 2.57 | 0.82 | MapAlign | | LDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHGGGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDGVFSMGNNSYGQCGRKVVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPR-------------------- |
9 | 2pffA3 | 0.40 | 0.35 | 10.34 | 1.13 | MUSTER | | VSKEHAPYTDELEE-LARVSKDKKSGSLTFNSKNIQSKDSYGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------- |
10 | 2pffA3 | 0.47 | 0.35 | 10.08 | 0.72 | HHsearch | | PLARVNSKNIQSKDS-YGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGG--GGGG---GGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGG--------GG--GGGGGGGGGGGGGG--GGGGGGGGGGGGGGG--------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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