Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSSSSSSSSCCCCCCSSSSCCCCSSCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHCCCSSSSSCCCCCCCHHHHCCCCCCCCCSSSSSSCHHHHHHHHHHCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCSSSSSCCCCCCCCCCCCCCSSHHHCCCCCSSSSCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAWRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDDSSPPSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPIS |
1 | 3eifA | 0.09 | 0.07 | 2.68 | 0.85 | EigenThreader | | NAALAYANLPDETKKAFDYAKSK--GVSIVTSAPDKQLTE-TATVKTD-DHQAKEMPVLSTN---RFEPNKAY-DYAYANRGMK--------------EDDFKDVKGKIALIER-GDIDFKDKIANAKKAGAVGVLIYDNQDKGF---PIELPNVDQMPAAFISRKDGLLLKD----NSKKTITF-NATPKVLPTAS----------------------------------------------------DTKLSRFSSWGLTADGNIKPDIAAPGQD--ILSSVANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTQMKNGDPKKEELDFGNLSALEKPIYDSKDGSSYYHEANSDAKDQLDGDGLQFYALKNNFTALTTESNPWTIIKAVKEGV |
2 | 3icuA | 0.43 | 0.18 | 5.28 | 1.41 | CEthreader | | ----------------------------GAMDGAEAVWTAYLNVSWRVPHTNRTVWELSEEGVYGQDSPLEPVAGVLVPPDGP-GALNACNPHTNFTVPTVGSTVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
3 | 6ar6A | 0.06 | 0.04 | 1.53 | 0.67 | DEthreader | | ------------------------------------------VTVFWLQSSFE---------------NSKGIQSM-------FSLQFIGHGKDEFNTD-----------VDLSEIAIEINLLGCNMFSYSINVGLLVKKIELMPSISIIVSNISSKEYISFN-----------------ENKITVKEERIEEAKNSDINYIKENLNAAFLLPTLSPISGAAIKELSSRANTATTAIITSSLIASGFSILLVPISA--TK------HVSLVETEGV----FTLLDDKIMMPQDDLVISEIDFNNNSILDLSKDLM----------------LPNAPNRVF----LLDRIRDNYEGEYYF----------------------------------------- |
4 | 3icuA | 0.43 | 0.17 | 5.06 | 1.33 | FFAS-3D | | -----------------------------AMDGAEAVWTAYLNVSWRVPHTNRTVWELSEEGVYGQDSPLEPVAGVLVPP-DGPGALNACNPHTNFTVPTVGSTVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
5 | 2ek8A | 0.12 | 0.10 | 3.37 | 1.61 | MapAlign | | -LSQAPRVAGSPEELKAVRYIEQQFKSYGYHVFEGYTAPSEVTLKIG-------TEKKEGEAFTY--SPNSDVTAELVYV------GLGTTADVAKDLN--------GKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNG-TLGGSDASFVAAVGITKQEGDALAANLRAGEKITATVKVAGAEVKTLEKAPGANDDASGVAVTLELARVMDTELRFITFGAELIGSKKYAASLSEDEIKRTGMFQYTIDGKKNRVTDLGASRLSGVLYGQEGSHEFHALGIPAALAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIEPIDYPRR------------------------------------------------------- |
6 | 3icuA | 0.41 | 0.17 | 5.01 | 1.36 | SPARKS-K | | ----------------------------GAMDGAEAVWTAYLNVSWRVPHTGRTVWELSEEGVYGQDSPLEPVAGVLVPP-DGPGALNACNPHTNFVPTVWGSTVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 3eifA | 0.10 | 0.10 | 3.48 | 1.55 | MapAlign | | --VEIVNGLADYARNYAQAIRDAVADSTLTVASYSPDKQLTETATVKTD-DHQAKEM--PVLSTN--RFEPNKAYDYAYA------NRGMKEDD-FKDVK-------GKIALIERGDIDFKDKIANAKKAGAVGVLIYDNQDKG-FPIEL-PN-VDQMPAAFISRKDGLLLKDN----SKKTITFNSVANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYMTPSERLDLAKKVLMSSVTVTVHNKSDKPQELYYQAT-----VQTDKVDGKHFAKTSWQKITIPANSSKQVSRFSKDLLAQRFKQDPKKEELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHEANSDAKDQLDGDGLQFYALKNNFTALTTESNPWTIIKAVKEGVENIEDIESSE |
8 | 3icuA | 0.42 | 0.17 | 4.92 | 1.36 | CNFpred | | -----------------------------------AVWTAYLNVSWRVPGVNRTVWELSEEGVYGQDSPLEPVAGVLVPPDG-PGALNACNPHTNFTVPTVWGSVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 3icuA | 0.43 | 0.18 | 5.21 | 0.89 | MUSTER | | ----------------------------GAMDGAEAVWTAYLNVSWRVPHTNRTVWELSEEGVYGQDSPLEPVAGVLVPP-DGPGALNACNPHTNFTVPTVWGSTVVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGP-WVN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3icuA | 0.43 | 0.18 | 5.28 | 2.17 | HHsearch | | ----------------------------GAMDGAEAVWTAYLNVSWRVPHTNRTVWELSEEGVYGQDSPLEPVAGVLVPPDGP-GALNACNPHTNFTVPTVGSTVQVSWLALIQRGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHG-PWVN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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