>Q8NBS3 (323 residues) MSQVGGRGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFEDSSYYKCDTDDTFEARE EILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLKNF KEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLMAMLF TDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRLVRPQNW GENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEEEFKEALVH QRQLLTMVSHGPVAPRTKERSTV |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MSQVGGRGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFEDSSYYKCDTDDTFEAREEILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLKNFKEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLMAMLFTDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRLVRPQNWGENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEEEFKEALVHQRQLLTMVSHGPVAPRTKERSTV |
Prediction | CCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSCSSSCHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCSSSSSSSCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC |
Confidence | 98666776533333664132268866566666754355776356773123544312345653254333467775234654135420232014666765456788156664012102122688888764399874103588358779999999999999863345677668999999975202456543333201331011025777521120058999744544664799998178311366787558999997378788752399999999999738999999986699999999999999999874388878888887889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MSQVGGRGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFEDSSYYKCDTDDTFEAREEILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLKNFKEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLMAMLFTDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRLVRPQNWGENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEEEFKEALVHQRQLLTMVSHGPVAPRTKERSTV |
Prediction | 75423443420353242123123444442346343347433143443142425442535554356641533633133353122112132424445445545643211011434314154045413233303500440001021544314400430043026446364551325302421134444434341422453153234544424143110001031650432100001044034125433200000000002445533301200210010012450143016064363025003533431333673233475655446 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSCSSSCHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCSSSSSSSCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC MSQVGGRGDRCTQEVQGLVHGAGDLSASLAENSPTMSQNGYFEDSSYYKCDTDDTFEAREEILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLKNFKEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLMAMLFTDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRLVRPQNWGENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEEEFKEALVHQRQLLTMVSHGPVAPRTKERSTV | |||||||||||||||||||
1 | 5jhoA | 0.16 | 0.12 | 3.90 | 0.98 | MUSTER | -------------PSQRVQFILGTEEDEEHVPHEL------FTELDEICMKEGEDAE-KETA------------------LKF----DVE------DGGE--------RWSKPYVATLS----LHSLFELRSCLINGTVLLDMHANSIEEISDLILDQQELSSDLN--DSMRVKVREALLKKHHHQNEKKV-----DLHFMKKIPTGA---EASNVLVGEVDILDRPIVAFVRLSPAVLLSGLTEVTRFLFILLGP--VGKGQQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQV----------------TV | |||||||||||||
2 | 1hynQ | 0.16 | 0.10 | 3.31 | 0.83 | DEthreader | ------------------------------------------------------------------------------EENLGE--N---------------------G-AWGRPHLSHL-T-FWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQI-RPQD-REELLRALLLHSELVKPAVL--------SPSGI--LEKIPEATLVLVGRADFLEQPVLGFVRLQEAAELE-LPVPIRFLFVLLGPE--APHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPALSLVQRLRYQSPA | |||||||||||||
3 | 5jhoA | 0.14 | 0.11 | 3.59 | 2.99 | HHsearch | ----------PSQRVQFILG-TEE--D------EEHVPHELFTELDEICMKEGE-------------------DAEWKETAR-WLKFEEDVEDG----GE-------RWS-KPYVA----TLSLHSLFELRSCLINGTVLLDMHANSIEEISDLILDQQELSSDLN--DSMRVKVREALLKKHHHQNEKKVHFMKKI-------P---TGAEASNVLVGEVDILDRPIVAFVRLSPAVLLSGLTEPTRFLFILLGPVGK--GQQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQVTVLP-------------- | |||||||||||||
4 | 1hynQ | 0.16 | 0.10 | 3.28 | 1.48 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------TFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQ--DREELLRALLLKSQPLLPQHSSLETQLFCEQGDGGTEPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEELPVPIRFLFVLLGP--EAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLV | |||||||||||||
5 | 5jhoA | 0.15 | 0.11 | 3.75 | 1.05 | CEthreader | ------------------------------------------------------PSQRVQFILGTEEDEEHVPHELFTELDEICMKEGEDAEARWLKFEEDVEDGGERWSKPYVATL-----SLHSLFELRSCLINGTVLLDMHANSIEEISDLILDQQELSSDLNDS--MRVKVREALLKKHHHQNEKKVDL--------HFMKKIPTGAEASNVLVGEVDILDRPIVAFVRLSPAVLLSEVPIPTRFLFILLGPVGKG--QQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQVTVLP-------------- | |||||||||||||
6 | 4ky9A | 0.16 | 0.09 | 3.10 | 1.82 | CNFpred | -------------------------------------------------------------------------------------------------------------------------LTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIR--PQDREELLRALLLKHSHAGELEALG---GVKPAVLT----PDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAVEVPIRFLFVLLGPEAP--HIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLV | |||||||||||||
7 | 1hynQ | 0.15 | 0.10 | 3.46 | 1.65 | SPARKS-K | --------------------------------------------------------------------------------------HKVYVELQELVMDEKNQELRWMEAALSHLT-------FWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQI--RPQDREELLRALLLKHSHAGELEVLTRSGDPSQPLLPQHSSLESEATLVLVGRADFLEQPVLGFVRLQEAAELEELPVPIRFLFVLLGPEA--PHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLV | |||||||||||||
8 | 1hynQ | 0.15 | 0.10 | 3.36 | 1.50 | MapAlign | ----------------------------------------------------------------------------------HKVYVELQELVMDEKNQELRWMEAARWVQNGAWGRPHLSHLFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIF--EDQIRPQDREELLRALLLKHSHAGELEALGGV--KPAVLTRSGDPSQPEATLVLVGRADFLEQPVLGFVRLQEAAELEAVPVPIRFLFVLLGPE--APHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVL--------------- | |||||||||||||
9 | 1hynQ | 0.13 | 0.09 | 3.25 | 1.23 | CEthreader | --------------------------------------------------------------------------------HKVYVELQELVMDEKNQELRWMEAARWVQENGAWGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQI--RPQDREELLRALLLKHSHAGELEALGGVKPAVLTRSGDPSQPLLEATLVLVGRADFLEQPVLGFVRLQEAAELEAVPVPIRFLFVLLGPE--APHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLV | |||||||||||||
10 | 1hynQ | 0.15 | 0.11 | 3.76 | 5.23 | HHsearch | ---------------------------------------HKVYELQELVMDE------------------KNQELRWMEAAR-WVQLEENL---------GENG---AWGR-----PHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIR--PQDREELLRALLLKHSHAGELEAGGVTRSGPETCEDGSGIPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEA-VEPIRFLFVLLGPEAP--HIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |