Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCSSSSSCCCHHHHCCCCCCCCCCSSCCSSSSSHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSSSSCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCC HQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRMNGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSMIEVLNTDSSPRCLKKL |
1 | 2nunA | 0.14 | 0.10 | 3.40 | 1.32 | MapAlign | | -TSFNEASRTSFGPSRQLVYDQCLIGARWPDDSNNRAYCQSMYNSIRSAGDEIS-------------RGGITFEELWGRATEWRLSKLLYSAFASE-------RTSDTDAVTPLV------KPYKSVLARVV-DHEDAH-----------------DEIMQDNLFGDL-N----------VKVYRQTAYL---HGNVIPLNTFRVALHLQRYNPDRIDHTN-ASYLPIIKDHLNDLYRQAI---------SSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPP-FRNGNVSDIEAMLS-GEEEFVEKYRSLLDSD-------------------------------------- |
2 | 2nunA | 0.17 | 0.11 | 3.73 | 1.28 | HHsearch | | PSQ-RQLEVYDQCLIGAA----RW-----PDD-SNTPENRAYCQSMYNSIRSAGDEISRG--------GITSFEELWGRATEWRLSKLQGEP-------LYSAFASETDAVTPLV-K-----PYKSVLARVVD--------HEDAH-DEIMQ-------------D--NLFG---DLNVKVYRQT---------A-YLHGNVIPLNT---------FRVATDTEYLAHLRSYLPIIKDHLNDLYRQ-AISS-DLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPF-RNGNVSDIEAMLSGE-EEFVEKYRSLLDSD-------------------------------------- |
3 | 2nunA | 0.11 | 0.07 | 2.54 | 1.02 | EigenThreader | | SQRQ---LE--------VYDQCLIGAARWPDDSNTPENRAYCQSMYNSIRSAGDEISR---------GGITSFEELWGRATEWRLS-KLQRGE-----PLYSAFASERTSDTD----AVTPLVKP-----------------------------------YKSVLARVVD-------HEDAKVYRQTAG-------NVIPLNTFRVATDNPDRID---HTNASYLPIIKDHLNDLYRQAI----------SSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPFRNGNVSD--IEAMLSGEEEFVEKYRSLLDSD-------------------------------------- |
4 | 2nunA | 0.15 | 0.10 | 3.37 | 1.00 | DEthreader | | ------------SQ-QLEVYDQCLIAARWPDDSNNRAYCQSMYNSIRSAGDEISRG--G----------ITSFEELWGRATEWRLSKLQELYAFASE-R----TSDT-DAVTPLV----K-P-YKSVLARVVDHEDAHD--EI--------------------------MQD--FG--DLNVKVYRQTAY-LHG-NVIPLNTFRVALRRVARLNDRIDHTNAS-YLPIIKDHLNDLYRQAI-S-SDL-------SQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIEL-PPFRNGNVSDIEAMLS-GEEEFVEKYRSLLDSD-------------------------------------- |
5 | 2nunA | 0.19 | 0.12 | 3.93 | 0.63 | SPARKS-K | | GPSQRQLEVYDQCLI-------------GAARWPDRAYCQSMYNSIRSAGDEISR------------GGITSFEELWGRATEWRLKLEPL----------YSAFASERTAVTPL---------------------------------VKPYKSVLARVVDHEDAH-------DEIMQDNLFGDLNVKVYRQTAHGNVIPLNTFRVATDQRYNPDRIDHTN--ASYLPIIKDHLNDLYRQAI--------SSDLSQ-AELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIEL---PPNGNVSDIEAMLSG-EEEFVEKYRSLLDSD-------------------------------------- |
6 | 4w8jA | 0.07 | 0.06 | 2.64 | 0.79 | MapAlign | | ---EF-VPGAGFVLGLGPSQWDAFLIEQLINQRIEEFARNQAISRLEGLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTL------------------------LAVQNYQVPLLSVYVQAANLHLSVLRDVSVFGQRWGFDAINSRYNDLVWGPDSRDWVRYNQFRSPHLMDILNSITIYTDAHRYYYWSGHQIMASPV--GFSGPEFTFYGIPVTATLEAEYNLERAQKAVNAL---FTSTNQLGLKTNVDYHIDQVSNLVTYLSDFSLDEKRELSEKVKHAKRLSERGWGGSTG----ITIQGGDDVFKENYVTLSYPTYLYQKHARLGNLEFLEEKPLVGEALARVKRAEKKWRDKREK- |
7 | 2nunA | 0.13 | 0.10 | 3.48 | 1.00 | CEthreader | | SFRALPGPSQRQLEVYDQCLIGAARWPDDSNTPENRAYCQSMYNSIRSAGDEISR------------GGITSFEELWGRATEWRLSKLQRGE--PLYSAFASERTSDTDAVTPL-------VKPYKSVLARVVDHEDAHDEIMQDNLFGDLNVKVYRQTAYLHGNVIPLNTFRVATDTEYLRDRVAHLRTELGAKALKQHLQRYNPDRID---------HTNASYLPIIKDHLNDLYRQAIS---------SDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIEL-PPFRNGNVSDIEAMLSGEEEFVEKYRSLLDSD--------------------------------------- |
8 | 2nunA | 0.15 | 0.11 | 3.72 | 0.49 | MUSTER | | PSQ-RQLEVYDQCLIGAA-------RWPDDSNTPNRAYCQSMYNSIRSAGDEISRG------------GITSFEELWGRATEWRLSLQRGEP-------LYSAFASDTDAVTPL-VKP-----Y--------KSVLARVVDHEDAHDEIMQDNLFGDLN--------VKVYRQTAYLHGNVIPLNTFRVATDTEYLRDRVAHLALKQHLQRYNPDRIDHT-NASYLPIIKDHLNDLYRQAIS---------SDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELP-PFRNGNVSDIEAMLSG-EEEFVEKYRSLLDSD-------------------------------------- |
9 | 2nunA1 | 0.17 | 0.09 | 2.91 | 1.12 | HHsearch | | PSQ-RQLEVYDQCLIGAA----RWPDD------SNTPENRAYCQSMYNSIRSAGDEISRG--------GITSFEELWGRATEWRLSKL------------------QR--------GEP--------LYSA---------------------------------------FASE-----------------RTSD------------------------TDNASYLPIIKDHLNDLYRQAISS---------DLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPF-RNGNVSDIEAMLS-GEEEFVEKYRSLLDSD-------------------------------------- |
10 | 2nunA | 0.15 | 0.10 | 3.46 | 0.78 | FFAS-3D | | ----RQLEVYDQCLIGAA-------RWPDDSNTPENRAY---CQSMYNSIRSAGDEISRGGIT--------SFEELWGRATEWRLSKLQRG------EPLYSAFASERTSDTDAVT-----------------------------PLVKPYKSVLARVVDHED-----AHDEIMQDNLFGDLNVKVYRQTAYLHGNVIPLNTFRVATDTQRYNPDRID-HTNASYLPIIKDHLNDLYRQAI---------SSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIEL-PPFRNGNVSDIEAMLSG-EEEFVEKYRSLLDSD-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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