Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHCCC MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSAGSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAEHENRELQSKEFLSA |
1 | 7crzA | 0.14 | 0.12 | 4.14 | 1.17 | DEthreader | | TQK-VTPALIFAITVATIGSFQFGYNTGVINAPEKIIK-EFITKTLTGNAPP---------SEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVKSVEMLILGRLVIGLFCGLCTFVPMYIGEISPTLRGAFGTLNQLGIVVGILVAQIFGLILGSEELWPLLLGFTILPAILQSAALPFCPESPRFNSMKQVTVLE---------RV-------------------- |
2 | 4zowA1 | 0.10 | 0.08 | 2.88 | 2.05 | SPARKS-K | | ---RLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQY----------------------QAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQN--IEQFTLLRFLQGISLCFIGAGYAAIRESFEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEK------------------------------------ |
3 | 4gbyA1 | 0.12 | 0.11 | 3.88 | 0.63 | MapAlign | | ------SYIFSITLVATLGGLLFGYDTAVISGTVESLNTV-FVAPQNL-------------SESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPEAGYVPEFVIYRIIGGIGVGLASMLSPYIAELAPHIRGKLVSFNQFAIIFGQLLVYVNYFIALNTDGWRYMFASECIPALLFLMLLYTVP--ESPRW-LMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDH-- |
4 | 4gbyA | 0.10 | 0.09 | 3.38 | 0.34 | CEthreader | | ---YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQN--------------LSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTG |
5 | 6e9nA1 | 0.15 | 0.12 | 4.11 | 1.25 | MUSTER | | ------RRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGI----------------------TKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATG--LMSLIGLRAITGIFEPAFPTNNRMVTSWFEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDA------------------ |
6 | 6e9nA | 0.15 | 0.13 | 4.26 | 1.52 | HHsearch | | ------RRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGI----------------------TKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATG--LMSLIGLRAITGIFEAPAFPTNNMVTSWFPHERASAVGFYTSGQFVGLAFTPLLIWIQE-MLSWHWVFIVTGGIGIIWSLIWFKVYQ-PPRLTKGISKAELDYIRDGGGL----VDGDAPLTAKDWKLVFHR |
7 | 4zowA1 | 0.11 | 0.09 | 3.10 | 1.72 | FFAS-3D | | --RLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQA-----------------------GIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEK------------------------------------ |
8 | 4gbyA1 | 0.10 | 0.09 | 3.38 | 1.03 | EigenThreader | | ---YNSSYIFSITLVATLGGLLFGYDTAVISGT--------VESLNTVFVAPQ------NLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFVPEFVIYRIIGGIGVGLASMLSPMYIAEPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTG |
9 | 6e9nA | 0.15 | 0.11 | 3.85 | 1.45 | CNFpred | | --------RYLTLVMIFITVVICYVDRANLAVASAHIQEEF----------------------GITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFAT--GLMSLIGLRAITGIFEAPAFPTNRMVTSWFPHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKGIS--------------------------KAELDYIRDG |
10 | 4pypA | 0.12 | 0.10 | 3.59 | 1.17 | DEthreader | | -----TGRLMLAVGGAVLGSLQFGYNTGVINAPQKVIE-EFYTQTWVYGESI---------LPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKGKSFEMLILGRFIIGVYCGLTTGVPMYVGEVSTALRGALGTLHQLGIVVGILIAQVFGLIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPFINMMKKVTI-L-------E--RS------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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