Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCSSSSCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCC MPRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITFISGSAEPALESPTCCLLWRPWVWEWCRAAFCFRRCRDCLQRCGACVRGCSPCLSTEDSTEGTAEANWAKEHNGVPPSPDRAPPSRRDGQRLKSTMGSSFSYPDVKLKGIPVYPYPRATSPAPDADSCCKEPLADPPPMRHSLPSTFASSPRGSEEYYSFHESDLDLPEMGSGSMSSREIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRGIIRISTRKSRARPQTSEGRSTRAAAPTAAAPDSGHETMVGSGLSQDELTVQISQETTADAIARKLRPYGAPGYPASHDSSFQGTDTDSSGAPLLQVYC |
1 | 4btgA3 | 0.08 | 0.06 | 2.53 | 1.01 | SPARKS-K | | AFAIGELKNQLSVGALQLPLQFTRTFSASMTSELAYVYRVGRTATYPFDANAVVSSVLTILPSTKELDPSARLRNTNGIDQLRSNLAIAYQDMVKQR-----GRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPIN---ETTSYIGQTSAIDHMGQPSH-------VVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGAPIGNTRGTVNSNGAEFPSVVERDYALDRD------------------PMVAIAALRTGIVDESASNDLKRSMFNYYAAVMHYAAHNPEVVVSEHQGLYLVWNVRTELRIPVGYNA------IEGGSIRTPEPLEAIAYNKPIQPSEVLAKVLDLANHTTSIHIWP----------------------------- |
2 | 1vt4I3 | 0.07 | 0.07 | 2.76 | 1.79 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 1vt4I3 | 0.06 | 0.06 | 2.70 | 0.93 | CEthreader | | NLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 3vldA | 0.04 | 0.04 | 2.00 | 0.65 | EigenThreader | | -VENLLTQLENELNEDNLPEDINTLLRKCSLNLVTVVSLPDDVKPLLATIKRFLTS--------------NVSYDSLNYDYLLDVVDKLVDVLEVYSAEDLVKALRSEIDPLKVAACRVIENSQPKGLFATSNIIDILLDILFDEKVENDKLITAIEKALERLS-------TDELIRRRLFDNNLPYLVSVKGRETVSFVRLIDFLTIEFQFISGPEFKDIIFC---------FTKEEILKSVLVFIELVNYYTKFLLEIRNQDKYWALRHVKKILPVFAQLFEDPDVRAFSLLQLFAEVSRIEEDEYDKDSLKIGSEAKLITEWLELINPQYLVKYHKDVVENYFHRNL---SADEECFNAIRNKFSAEIVLRLPYLEQQVVETLTRYEYTSKFLLN |
5 | 5mqfT | 0.10 | 0.09 | 3.18 | 0.52 | FFAS-3D | | --------KNSLAYQRMSWEALKKSLINKVNISNISIIIQELLQENIVRGRGLLSRSV------LQAQSASPIFTHVYAALV-----AIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAEKFFGLLAGRF--CMLKKEYMESEGIFKEQYDTI-HRLETNKLRNVAKMFTDSLPWSVLECIKLSEETTTSSSRIFVKNARLKDETLQPFFEGLLPRDNPRINFFTSIGLGGLTDELREH------------------------------ |
6 | 6e5oY | 0.08 | 0.08 | 3.09 | 0.96 | SPARKS-K | | QPASKKIDQNKLKPEMDEKGYTNYFGRCNVAEHEKLILLAQLKPVKDSDSLGKFGQALDFIHVTKESKPLAQIAGNRYASGPVGKALSDACMGTIASFLSKYQDIIIEHQKVVKGNQKRLESLRENLEYPSVTLPPQPHTARVRMWVNLNLWQKLDDAKPLL--RLKGFP-SFPVVRRENEVDIDAKRDNYLPNENDHKKRENPKKPAKRQFGDLLKVFDELTSHIEREEARNAEDAQ-SKAVLTDWLRAKASFVLERL-KEMDEKEFYACEIQLQKWYGDLRGNFAVEAENRVVDISRNLLAWKYLENGKKKGRIRFTDGTDIKKSGKWQGLLYGVIDLTFDPDDEQLIILPLAFGT-RQGREFIWNDLLSLETGKTIYNKKIGRDEPALFVALTFE |
7 | 6teqA | 0.13 | 0.03 | 1.05 | 0.41 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DETMKKRVRHVVTEIERVRSFVRAFAQG---DIKAAGRLFNASHDSLAADYEVTVLDIAVDVARYGARMTGGGF-------------------------------------GSIIALVDKGQGHEIAQKIAD------------------------------- |
8 | 7cpxA | 0.04 | 0.03 | 1.41 | 0.67 | DEthreader | | -------------------------------------------------AQSMYPNEPIVV-HLLVYVMRIQDLQGTSTWHGLGQSSMAIAAGAG-AVCSVVLKLALRDGDTIECASFAVRHGVWR-EYMEP---L---------------------IHLHDL--------WSLLRIVGHSHTIRLLLPAYPWDRSRRYWVESRARHYSTFQWLYAA-DMSID--A-VSRTISFKAKGQVPTHVDRNTYDKGDYLS-----HAMFNNRMNSSRRP------------------------A--SLWAFGPLVLQDVMLNNMEMNPGQAYSIGAVYGVGFVTRAELEF--ELHTFAEAVVAGRRAVHQ--QEQQRKF--ATVLDMADL---ELTT----- |
9 | 3fsnB | 0.07 | 0.06 | 2.64 | 1.53 | MapAlign | | TAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFPEVTDNALVNIYPVGEDYYACTETNF-----ITKVNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYN------IGNCFGKNFSIAYNIV------------KIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSENWEEVKKNARKAPQPEVRRYVLPLNIDKADGKNLVTLPNTTATAILLEPEVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGLNHFVPDRLCKEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEV |
10 | 2nbiA1 | 0.17 | 0.15 | 4.80 | 0.79 | MUSTER | | --QPSDLNPSSQPSECADVECPIDECFLPYSDASRPPSCLSFGRPDDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPI--------CSPTMLP--------TNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDEC-FLPYGDSSRPLD---------------------CTDPAV----NRPDCDVLPT--QNINCP---FECRPDNPMF---TPSPDGSPPICSPTMMPSPEPSSQPSDCGEVPIDACFLPKSDSA---RPPDCTAVGRPDCNVLPFPGCPSCCPFECSPDNTPSPGSPPNCSPT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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