Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCSSSSSHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCSSSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHCCC MSDCCSAPGISWEAGVGRPAVPGLELQIRRGAMSEETVSESQFSLKTAALRVFDLPLTWYYSLSQIKFSPVAKKLFVVTAVSAISVIFLAHHFKRKRGKKKGKILPWEPEHLILEYTKRAASDKGSSCSSSRQNLTLSLSSTKDKGSQVCNYANGGLFSKYSGSAQSLASVQSVNSCHSCACGNSNSWDKADEDDIKLVNIPVTTPENLYLMGMELFEEALRRWEQALTFRNRQAEDEACGSIKLGAGDAIAEENVDDIISTEFIHKLEALLQRAYRLQEEFEATLGASDPNSLADDIDKDTDITMKGNVEDFGLRDTLSIASTDSFASAAELAEHREVRHTYSLESLCHCPFYEEAMHLVEEGKIYSRVLRTEMLECLGDSDFLAKLHCIRQAFQVILSESANRIFLAESGRKILSALIVKARKNPKKFEDVFDEMIYFLEQTDHWGSTEMELAARGVKNLNFYDVVLDFILMDSFEDLENPPTSIQNVVNNRWLNSSFKETAVASSCWSVLKQKRQQMKIPDGFFAHFYAICEHISPVLAWGFLGPRNSLYDLCCFFKNQVLLFLKDIFDFEKVRYSSTETLAEDLMQLLIRRTELLMAYLEADALRHTSSCLSSHGHVMSTGLLEAKVQ |
1 | 2z6hA | 0.12 | 0.08 | 2.70 | 1.12 | CNFpred | | --------------------------------------------SRHAIMRSPQMVSAIVRTMQNT--NDVETARCTAGTLHNLSHREGLLAIFKSGGIPA---------------------------------------------------------------------------------------------LVKMLGSP---VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL--------------NKTNVKFLAITTDCLQILAYGNQESKLIILASGPQALVNIM--------------------RTYTYEKLLWTTSRVLKVLSV-----CSSNKPAIVEAGGMQALGLHTDPSQRLVQNCLWTLGMEGLLGTLVAAGILSNLTCNNYKNKMMVCQVGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH-----YGLPVVVKLLHPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQR-----VRMEEIVEGCTGALHILAR-----DVHNRIVIRGNTIPLFVQLLYSPI---ENIQRVAAGVLCELAEAAEAIEAEGATAPLTEL--------------------- |
2 | 6igxB | 0.07 | 0.06 | 2.68 | 1.24 | MapAlign | | ---------LLSIKEAFRLAQQPHQNQAKLVVALSRTYRTMDDKTVFHEEFIHY-----LKYVMVVYKREPAVERVIEFAAKFVTLNYLFTFLLKSHEANSNAVRFRVCLLINKLLGSMPDDVFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVVNAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVAMSIAQRVMLLQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLSEVAVSVLNALFELVGLCKIPVETLTPEIALYWCALCEYLKSKGDEGEEFLEQILPEPVVYADYLLSYIQSIPGNLMTKEF-IGQQLILIIKSLDEEGGRKKLLAVLILILPTIPISLVSFLVERLLHIIIDDNKRTQIVTEIISEI---RAPIVAETLQKCLILCYELLKQMSTGLSATMNGIIESLILPGIVRNLAVLCLGCCGLQNQD-FARKHFVLLLQVLQDDVTIKISALKAIFDQLMTFLSDFLDSEVSELRTGAAEGLAKLMLILLWYTEEDVQLRHCLGVFFNQECFEEAFLPTLQTLAPASSPLATNVAELLVDLTHDNLAMKICNEILTSPCSPEIRVYTKALSSLELSSHL |
3 | 2pffB | 0.16 | 0.11 | 3.77 | 1.01 | HHsearch | | --------------------------------------------------------MDAYSTRPTLSHGSLEHVLLV----PT-ASFFIASQLQEQFNKIL--PEPTEG--FAADDEPTTPAE-----------LV--GKFLGY-------VSSLVEPSKVGQFDQVLNLC---------LTEFENCYLEG-NDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNS--ALFRAVGEGQLVAIFGGQ-GNTDDYFEELRDLYQTYHVLVG--------------------------------------------------------------------DLIKFSAETLSELIRTTLDAEKVILEWLENTPDKDYLL---SIPISCPLIG--------VIQLAHYVVTAKLL--GFTPGE-------LRSYLKGATGHSQTAVAIAET-DSWESFFVTVLFFIGVRCYEAYPSLPPSILELENNEGVPSPMSISNLQEQVQDYVNKTNSHLPAGKQVEISLVN------GAKNLVVSGPPQSLYGLNLTLRAKAPSGLDQSFDGSDLRVLS-GSISERIVDCIIRLWETTTQFKATHIL-DFGPASGTGVRVIVAGTLDINPY |
4 | 6igxB | 0.06 | 0.06 | 2.58 | 0.75 | CEthreader | | AKLVVALSRTYRTMDDKTVFHEEFIHYLKYVMVVYKREPAVERVIEFAAKFVTSDGGLLNYLFTFLSHEANSNAVRFRVCLLINKLLGSMPDDVFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVVNAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRAMSIAQRVMLLQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLDVENSSEVAVSVLNALFSITPLSELVGLCKIPVETLTPEIALYWCALCEYLKSKGDEGEEFLQSIPGNLMTKEFISLDEEGGRKKLLAVLQEILILPTIPISLVSFLVERLLHIIIDDNKRTQIVTEIISEIRAPIVAETLQKCLILCYELLKQMSISTGLSATMNGIIESLILPGIISIHPVVRNLAVLCLGCCGLQNQDFARKHFVLLLQVLQIDDISALKAIFDQLMTFGIEPFKTTAKNVLKLLSDFLDSEVLRTGAAEGLAKLMFSGLLVSSRILSRLILLWYNPVTEEDVQLRHCLGVFFPVFAYASRTNQECFEEAFLPTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGALTVHDNLAMKICNEILTSPCSPEIRVYT |
5 | 5oqrA | 0.07 | 0.06 | 2.70 | 0.93 | EigenThreader | | QTSIAGHRKLCNKLFTLRTQGFETDILRALNIILTDRVLRFLVTFVNYLQQILRGLD-------AKDKTVRYRCCQIIARVVNIVRLEAVVALSRLQENDVRNILLFLLQNDPSSEVRRSVLLNIEVSNSTLPFILERARDVDAANRKCVYARVLPKIGDFRYLSIKKRVRILKWGLNDRDAYQWIENADNNLLELLERLDVSNNSDVAVLAIKKFFDVRSSLLARTFNEICIEKNYKMPEVVQLTYYIERQYVSLRDKSSYDESCFIIEQLLYIGLSQSLTNSLSTMALPDSLISLHIELLRKLCSSENDFCSLLVEIITEVFEQGHCLSYVQCLFENITSSLNENLYMVDMLKTLIIPAVRSHDEKGLECLSLVCLLNADLAFENVPLYLHCYEKG------SVVLKCTAIRTLTDMLIQHGKAKFTEYEDAISSILFEALGEFE---------------NAELQTLGAEAIAKLLVILHYRKPLIIQYFEPNTVDNHALRQVLGYFFPVYAF-----GAHENQWRIATIFCDALLSLLEIYRDDDVQLSIGHIAQQMLDWTLHLANMIFESLPNASEGKERKFMISLLGKLKSDYQRTKRKLETYESHGFTMDSTSLSILAKFERMLLQ |
6 | 6vacA | 0.12 | 0.11 | 3.81 | 0.96 | FFAS-3D | | ----RKVADLYELVQYAGNIIPRLYLLITVGVSFPQSRKDILKDLVEMCRGVQH-PLRNYLLQCTRNILPDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMELQTLNPFLRACAELHQNVNVKNIIIALIDRLAHREDGPGIPAEIKLFDIFSQQVATVIQSQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLI--------------QFADEQSLVGR--------FIHLLRSDDPDQQYLILNTARKHFGAGGNQRFTLPPLVFAAYQLAFRYKENSQMDQKIFSFAHQTISALIKAELAELPLRLFLQGALAGFENHETVAYEFLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGCAHFWRVMECLKKALKIA--NQCDPSLQVQLFI--EILNRYIYFYEKTI-------QVLNQLIQKIREDTEQINKHF-HNTLEHLRS------------------- |
7 | 5wtjA1 | 0.13 | 0.12 | 4.09 | 0.87 | SPARKS-K | | ------------------------TTVNTDDFSRLHAKEELDLELITFFASTNEL-NKIFSVLDKKILNSKIKIIRDNFIRKFTKIGTNERNRILHAISKERDLQGTQDDYNKVINIIQNLKISDEEVSK-----ALNLDVVFKDKKNIITKINDIKISEENNDIKYLPSF-------SKVLPEILNLNNPKNEPFDTIETEKIVLNALIYVNKELYKKLILEFLQELKKTLGNEIDENIIENYYKNAQISASKGNNKAIKKYQKKVIECYIGYLRKNYEE---LFNIQEIKKQIKDINDNKTY---ERITVKTSDKTIVINDDEYIISIFALAVINKIRNFATSVWLNTSE-YQNIIDILDEIQL--NTLRNECITENWNEEFIQKKEIFNNYYEDIKNNEIKSKILCKKYKKEIDNLIEDESENENKFQEIYKNLFLNIGNPNIYGLISNDIKA-DAKFL--------------FKNIKNKISEIDAILKNLFFAKNIQYKSFEKDYNRVSEYKKIRDLVEFNYLNKIESYLIDINWKLAIQARPENESIRNYISHF-----YIVRNPFA----DY-SIAEQIDRVSNLLNSTYASVFEVFKKDELKKKFKLIGNNDKPKKVSVLELESY |
8 | 4xriA | 0.11 | 0.08 | 2.81 | 1.06 | CNFpred | | -----------------------------------------NEVRFAAITALGDSLEFVGNNFKHEGERNYIMQVVCEATIQQGAFGCLNRIMALY----YEHMRYYMEKALFGLTILGMKSD----------------------------------------------------------------------------------DEDVAKLAVEFWSTVCEEEIAIEDDNAQVESSEQM----------RPFYNFARVATNEVVPVLLQLLTKISRAAYQCLQLYAQAVGSTIIPPVIQFV---------------EHNLRHADWHFRDAAVSAFGAIMDGPEEKVL--EPIVKTGMQPLIA-----------MMEDESIQVRDSTAYALGRITEACSEAIDPNTHLEPLIRSLFNGLMNSP-KMAASCCWALMNIAERFALTPHFNQSVTNLLTV-STVRTAAYEVLSVFVQNAANDSLSAVASLSTVILQRLE-DKLILEDMQTSLCTVLQATVQRLD--KEIAPQGDRIMQVLLQILS--TCGGKSSVPEGVFAAISALANAMEEE------FAKYMEAFAPFLYNALGNQEEPSLCSMAIGLVSDVTRSLGERSQPYCDNFMNYLLG |
9 | 6um1A | 0.05 | 0.03 | 1.53 | 0.67 | DEthreader | | GP-----SCSLAVDLQ-P-------L--VEASDSLFSICGGSQACKKDAAVC---------------------------GEECSSGFQRMSVEVCTYFFTWDTKYACVH-EKEALLCGVSRFDLSAL--WEAVDGRKKHFFI---QTGQARCAAVCLGSYITSRADGFYEFETLDQYDLSRAVCRVAKTGPMVESLLAACPIRIDQLSTGFITLNYTG--LP-SH---------------------------------------P-NG--RA--DA--F--II------RFV-CNDDVYPGTP-----------IPGCHGVCCLLNLGV--------------------GDKCK-NQR----------FSTRINTFQLQN-CEY-VF--LWR-TVEACPVVDPRHGNSSLSRYSDNW-EAV--TGSTEHYLINVKSLSPCPPEAAVN-GRVRDSPQWS-----L------TTIRFTC--SE--S--H------------------SR-PMF-IS--AV--EDCE---Y--TF-SW-PTA-A---------------PATGHLFTYVDQVLQLVISFLISL-----FFSWHTPLACEQTTECQPVAGPPIYLNFE-------RHFNYTSLIDF |
10 | 5oqrA | 0.06 | 0.06 | 2.60 | 1.18 | MapAlign | | SQTSIAGHRKLCNKLFTLRTQGFETDILRALNIILTVKKGNSNADRVLRFLVTF--VNYLQQKDPEIDIVQPILKHILRGLKTVRYRCCQIIARVVNCVKEIDDDLYNTLKEKLLSRVLDRESIVRLEAVVALSRLQENDVRNILLFLLQNDPSSEVRRSVLLNIEVSNSTLPFILERARDVDAANRKCVYARVLPKIGDFRYLSIKKRVRILKWGLSVEKAAADMLAYQW-------IENADNNLLELLERLDVSNNSDVAVLAIKKFFDVTAESSLLARTFNEICIEKNYTDLLDKMPEVVQLTYYIERQYVSLRDKSSYDESCFIIEQLLYI---GLSQDMVDEIGRRKLLKSLTNSLSTMALSLISLHIELL-RKLCSSENDFCSLLVEIITEVFEQAFNELRCLSYVQCLFIIPAVRSHDPIREKGLECLSLVCLLNADLAVPLYLHCYEKVVLKCTAIRTLTDMLIQHKFTEYEDAISSILFEALENAELQT-LGAEAIAKLLELFLKPLIIQYTVDNHALRQVLGWRIATIFCDALLSLLSIGHIAQQMLDWTDHNVHLHLANMIFESLPASEGKERKFMISLLGKLPSSDYQRTKRKLETYESHGFTMDSTSLSILAKFERMLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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